Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/81/92e1fc2a5e355676660b4c2575a6ac/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/2c156c14026bb867a14f016d4c4c78/aih-tih-sc-da06ce-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/81/92e1fc2a5e355676660b4c2575a6ac/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory