Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/9ff7d993bff5316a0d1fde84300ac1/aih-tih-sc-3282fd-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/a3d6247466bac9ff49aca312dfb9cd/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/a3d6247466bac9ff49aca312dfb9cd/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory