Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e1/7f382e86f2a3e227957dce3b0a253c/aih-tih-sc-4bcd26-R1_A23YTGFLT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/09/ae9b0c4816ac2f09e2e65ed9824edf/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e1/7f382e86f2a3e227957dce3b0a253c/aih-tih-sc-4bcd26-R1_A23YTGFLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/09/ae9b0c4816ac2f09e2e65ed9824edf/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/24/e5c45b60f3f05d68ae910d55b9f53f/aih-tih-sc-4bcd26-R1_A23YTGFLT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.b2I8qhsNwL/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary
-sample contains 194210175 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir  -J /tmp/nxf.b2I8qhsNwL/aih-tih-sc-4bcd26-R1_A23YTGFLT4_1.Chimeric.out.junction  -O /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.b2I8qhsNwL/aih-tih-sc-4bcd26-R1_A23YTGFLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[1700000], rate=58654.40/min -building interval tree based on /tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[1700000], rate=50073.64/min -building interval tree based on /tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[1700000], rate=48295.45/min 
[1710000], rate=48373.41/min -building interval tree based on /tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=120000.00/min 
[20000], rate=120000.00/min 
[30000], rate=128571.43/min 
[40000], rate=141176.47/min 
[50000], rate=142857.14/min 
[60000], rate=144000.00/min 
[70000], rate=161538.46/min 
[80000], rate=165517.24/min 
[90000], rate=158823.53/min 
[100000], rate=153846.15/min 
[110000], rate=153488.37/min 
[120000], rate=156521.74/min 
[130000], rate=159183.67/min 
[140000], rate=158490.57/min 
[150000], rate=166666.67/min 
[160000], rate=165517.24/min 
[170000], rate=159375.00/min 
[180000], rate=158823.53/min 
[190000], rate=158333.33/min 
[200000], rate=160000.00/min 
[210000], rate=159493.67/min 
[220000], rate=160975.61/min 
[230000], rate=160465.12/min 
[240000], rate=156521.74/min 
[250000], rate=156250.00/min 
[260000], rate=156000.00/min 
[270000], rate=157281.55/min 
[280000], rate=157009.35/min 
[290000], rate=158181.82/min 
[300000], rate=136363.64/min 
[310000], rate=114110.43/min 
[320000], rate=101052.63/min 
[330000], rate=92093.02/min 
[340000], rate=85714.29/min 
[350000], rate=80152.67/min 
[360000], rate=76056.34/min 
[370000], rate=72077.92/min 
[380000], rate=68468.47/min 
[390000], rate=65000.00/min 
[400000], rate=62337.66/min 
[410000], rate=60442.26/min 
[420000], rate=58604.65/min 
[430000], rate=56209.15/min 
[440000], rate=54885.65/min 
[450000], rate=53359.68/min 
[460000], rate=52075.47/min 
[470000], rate=51272.73/min 
[480000], rate=50261.78/min 
[490000], rate=49662.16/min 
[500000], rate=49180.33/min 
[510000], rate=48726.11/min 
[520000], rate=48297.21/min 
[530000], rate=48036.25/min 
[540000], rate=47858.20/min 
[550000], rate=47619.05/min 
[560000], rate=47524.75/min 
[570000], rate=47368.42/min 
[580000], rate=47346.94/min 
[590000], rate=47326.20/min 
[600000], rate=47306.18/min 
[610000], rate=47347.99/min 
[620000], rate=47208.12/min 
[630000], rate=47132.17/min 
[640000], rate=47174.45/min 
[650000], rate=47158.40/min 
[660000], rate=47199.05/min 
[670000], rate=47183.10/min 
[680000], rate=47167.63/min 
[690000], rate=47045.45/min 
[700000], rate=46770.60/min 
[710000], rate=46608.32/min 
[720000], rate=46601.94/min 
[730000], rate=46595.74/min 
[740000], rate=46589.72/min 
[750000], rate=46728.97/min 
[760000], rate=46865.36/min 
[770000], rate=46855.98/min 
[780000], rate=46987.95/min 
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[800000], rate=47477.74/min 
[810000], rate=47693.82/min 
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[830000], rate=48162.48/min 
[840000], rate=48414.99/min 
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[860000], rate=48863.64/min 
[870000], rate=49152.54/min 
[880000], rate=49438.20/min 
[890000], rate=49536.18/min 
[900000], rate=49315.07/min 
[910000], rate=48968.61/min 
[920000], rate=48849.56/min 
[930000], rate=48818.90/min 
[940000], rate=48746.76/min 
[950000], rate=48717.95/min 
[960000], rate=48896.43/min 
[970000], rate=49072.51/min 
[980000], rate=49205.02/min 
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[1000000], rate=48899.76/min 
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[1020000], rate=48726.11/min 
[1030000], rate=48853.75/min 
[1040000], rate=49056.60/min 
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[1080000], rate=49240.12/min 
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[1140000], rate=49386.28/min 
[1150000], rate=48117.15/min 
[1160000], rate=47573.48/min 
[1170000], rate=46987.95/min 
[1180000], rate=46794.45/min 
[1190000], rate=46484.38/min 
[1200000], rate=46272.49/min 
[1210000], rate=46036.78/min 
[1220000], rate=45893.42/min 
[1230000], rate=45611.87/min 
[1240000], rate=45476.77/min 
[1250000], rate=45235.22/min 
[1260000], rate=44733.73/min 
[1270000], rate=44587.48/min 
[1280000], rate=44316.21/min 
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[1300000], rate=43993.23/min 
[1310000], rate=43788.30/min 
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[1330000], rate=42857.14/min 
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[1350000], rate=42902.54/min 
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[1380000], rate=42923.79/min 
[1390000], rate=42857.14/min 
[1400000], rate=42922.84/min 
[1410000], rate=42770.48/min 
[1420000], rate=42878.71/min 
[1430000], rate=43007.52/min 
[1440000], rate=43135.30/min 
[1450000], rate=43262.06/min 
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[1470000], rate=43192.95/min 
[1480000], rate=43274.85/min 
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[1500000], rate=43415.34/min 
[1510000], rate=43245.82/min 
[1520000], rate=42998.59/min 
[1530000], rate=42797.20/min 
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[1570000], rate=42053.57/min 
[1580000], rate=42002.66/min 
[1590000], rate=41897.23/min 
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[1610000], rate=41655.89/min 
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[1650000], rate=41061.80/min 
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[1670000], rate=41149.90/min 
[1680000], rate=41210.14/min 
[1690000], rate=41202.76/min 
[1700000], rate=41262.14/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 9000000.00 reads per min processed...  
 4800000.00 reads per min processed...  
 4285714.29 reads per min processed...  
 4000000.00 reads per min processed...  
 3818181.82 reads per min processed...  
 3692307.69 reads per min processed...  
 3600000.00 reads per min processed...  
 3529411.76 reads per min processed...  
 3473684.21 reads per min processed...  
 3428571.43 reads per min processed...  
 3391304.35 reads per min processed...  
 3360000.00 reads per min processed...  
 3333333.33 reads per min processed...  
 3310344.83 reads per min processed...  
 3290322.58 reads per min processed...  
 3272727.27 reads per min processed...  
 3257142.86 reads per min processed...  
 3157894.74 reads per min processed...  
 3150000.00 reads per min processed...  
 3142857.14 reads per min processed...  
 3066666.67 reads per min processed...  
 3063829.79 reads per min processed...  
 3061224.49 reads per min processed...  
 3058823.53 reads per min processed...  
 3056603.77 reads per min processed...  
 3054545.45 reads per min processed...  
 3052631.58 reads per min processed...  
 3050847.46 reads per min processed...  
 3049180.33 reads per min processed...  
 3047619.05 reads per min processed...  
 3093750.00 reads per min processed...  
 3138461.54 reads per min processed...  
 3181818.18 reads per min processed...  
 3130434.78 reads per min processed...  
 3126760.56 reads per min processed...  
 3123287.67 reads per min processed...  
 3120000.00 reads per min processed...  
 3116883.12 reads per min processed...  
 3153846.15 reads per min processed...  
 3111111.11 reads per min processed...  
 3108433.73 reads per min processed...  
 3105882.35 reads per min processed...  
 3103448.28 reads per min processed...  
 3101123.60 reads per min processed...  
 3098901.10 reads per min processed...  
 3096774.19 reads per min processed...  
 3094736.84 reads per min processed...  
 3092783.51 reads per min processed...  
 3090909.09 reads per min processed...  
 3089108.91 reads per min processed...  
 3087378.64 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.b2I8qhsNwL/aih-tih-sc-4bcd26-R1_A23YTGFLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -524794.012868
EM: Round [1] log likelihood: -524612.230968
EM: Round [2] log likelihood: -524539.566067
EM: Round [3] log likelihood: -524503.906550
EM: Round [4] log likelihood: -524484.808528
EM: Round [5] log likelihood: -524474.058277
EM: Round [6] log likelihood: -524467.749109
EM: Round [7] log likelihood: -524463.887189
EM: Round [8] log likelihood: -524461.420602
EM: Round [9] log likelihood: -524459.779113
EM: Round [10] log likelihood: -524458.644255
EM: Round [11] log likelihood: -524457.832278
EM: Round [12] log likelihood: -524457.233509
EM: Round [13] log likelihood: -524456.780245
EM: Round [14] log likelihood: -524456.429303
EM: Round [15] log likelihood: -524456.152283
EM: Round [16] log likelihood: -524455.929958
EM: Round [17] log likelihood: -524455.748973
EM: Round [18] log likelihood: -524455.599822
EM: Round [19] log likelihood: -524455.475595
EM: Round [20] log likelihood: -524455.371167
EM: Round [21] log likelihood: -524455.282674
EM: Round [22] log likelihood: -524455.207150
EM: Round [23] log likelihood: -524455.142292
EM: Round [24] log likelihood: -524455.086283
EM: Round [25] log likelihood: -524455.037677
EM: Round [26] log likelihood: -524454.995305
EM: Round [27] log likelihood: -524454.958221
EM: Round [28] log likelihood: -524454.925645
EM: Round [29] log likelihood: -524454.896934
EM: Round [30] log likelihood: -524454.871550
EM: Round [31] log likelihood: -524454.849044
EM: Round [32] log likelihood: -524454.829038
EM: Round [33] log likelihood: -524454.811210
EM: Round [34] log likelihood: -524454.795286
EM: Round [35] log likelihood: -524454.781032
EM: Round [36] log likelihood: -524454.768246
EM: Round [37] log likelihood: -524454.756756
EM: Round [38] log likelihood: -524454.746411
EM: Round [39] log likelihood: -524454.737081
EM: Round [40] log likelihood: -524454.728653
EM: Round [41] log likelihood: -524454.721026
EM: Round [42] log likelihood: -524454.714116
EM: Round [43] log likelihood: -524454.707845
EM: Round [44] log likelihood: -524454.702146
EM: Round [45] log likelihood: -524454.696961
EM: Round [46] log likelihood: -524454.692237
EM: Round [47] log likelihood: -524454.687928
EM: Round [48] log likelihood: -524454.683993
EM: Round [49] log likelihood: -524454.680395
EM: Round [50] log likelihood: -524454.677103
EM: Round [51] log likelihood: -524454.674087
EM: Round [52] log likelihood: -524454.671321
EM: Round [53] log likelihood: -524454.668782
EM: Round [54] log likelihood: -524454.666449
EM: Round [55] log likelihood: -524454.664304
EM: Round [56] log likelihood: -524454.662330
EM: Round [57] log likelihood: -524454.660511
EM: Round [58] log likelihood: -524454.658835
EM: Round [59] log likelihood: -524454.657289
EM: Round [60] log likelihood: -524454.655861
EM: Round [61] log likelihood: -524454.654542
EM: Round [62] log likelihood: -524454.653322
EM: Round [63] log likelihood: -524454.652194
EM: Round [64] log likelihood: -524454.651149
EM: Round [65] log likelihood: -524454.650181
EM: Round [66] log likelihood: -524454.649284
EM: Round [67] log likelihood: -524454.648452
EM: Round [68] log likelihood: -524454.647680
EM: Round [69] log likelihood: -524454.646963
EM: Round [70] log likelihood: -524454.646296
EM: Round [71] log likelihood: -524454.645677
EM: Round [72] log likelihood: -524454.645101
EM: Round [73] log likelihood: -524454.644565
EM: Round [74] log likelihood: -524454.644066
EM: Round [75] log likelihood: -524454.643601
EM: Round [76] log likelihood: -524454.643167
EM: Round [77] log likelihood: -524454.642763
EM: Round [78] log likelihood: -524454.642386
EM: Round [79] log likelihood: -524454.642034
EM: Round [80] log likelihood: -524454.641705
EM: Round [81] log likelihood: -524454.641398
EM: Round [82] log likelihood: -524454.641111
EM: Round [83] log likelihood: -524454.640842
EM: Round [84] log likelihood: -524454.640591
EM: Round [85] log likelihood: -524454.640356
EM: Round [86] log likelihood: -524454.640136
EM: Round [87] log likelihood: -524454.639929
EM: Round [88] log likelihood: -524454.639736
EM: Round [89] log likelihood: -524454.639555
EM: Round [90] log likelihood: -524454.639385
EM: Round [91] log likelihood: -524454.639225
EM: Round [92] log likelihood: -524454.639075
EM: Round [93] log likelihood: -524454.638934
EM: Round [94] log likelihood: -524454.638801
EM: Round [95] log likelihood: -524454.638677
EM: Round [96] log likelihood: -524454.638560
EM: Round [97] log likelihood: -524454.638450
EM: Round [98] log likelihood: -524454.638346
EM: Round [99] log likelihood: -524454.638248
EM: Stopping iterations at round 99 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -524551.251462
EM: Round [1] log likelihood: -524388.372304
EM: Round [2] log likelihood: -524325.132019
EM: Round [3] log likelihood: -524294.998439
EM: Round [4] log likelihood: -524279.236517
EM: Round [5] log likelihood: -524270.529241
EM: Round [6] log likelihood: -524265.504316
EM: Round [7] log likelihood: -524262.478595
EM: Round [8] log likelihood: -524260.577156
EM: Round [9] log likelihood: -524259.331218
EM: Round [10] log likelihood: -524258.481915
EM: Round [11] log likelihood: -524257.881661
EM: Round [12] log likelihood: -524257.443496
EM: Round [13] log likelihood: -524257.114456
EM: Round [14] log likelihood: -524256.861223
EM: Round [15] log likelihood: -524256.662175
EM: Round [16] log likelihood: -524256.502864
EM: Round [17] log likelihood: -524256.373374
EM: Round [18] log likelihood: -524256.266720
EM: Round [19] log likelihood: -524256.177874
EM: Round [20] log likelihood: -524256.103136
EM: Round [21] log likelihood: -524256.039735
EM: Round [22] log likelihood: -524255.985555
EM: Round [23] log likelihood: -524255.938959
EM: Round [24] log likelihood: -524255.898660
EM: Round [25] log likelihood: -524255.863632
EM: Round [26] log likelihood: -524255.833052
EM: Round [27] log likelihood: -524255.806248
EM: Round [28] log likelihood: -524255.782669
EM: Round [29] log likelihood: -524255.761860
EM: Round [30] log likelihood: -524255.743438
EM: Round [31] log likelihood: -524255.727085
EM: Round [32] log likelihood: -524255.712532
EM: Round [33] log likelihood: -524255.699548
EM: Round [34] log likelihood: -524255.687938
EM: Round [35] log likelihood: -524255.677535
EM: Round [36] log likelihood: -524255.668194
EM: Round [37] log likelihood: -524255.659791
EM: Round [38] log likelihood: -524255.652218
EM: Round [39] log likelihood: -524255.645382
EM: Round [40] log likelihood: -524255.639200
EM: Round [41] log likelihood: -524255.633601
EM: Round [42] log likelihood: -524255.628522
EM: Round [43] log likelihood: -524255.623910
EM: Round [44] log likelihood: -524255.619714
EM: Round [45] log likelihood: -524255.615893
EM: Round [46] log likelihood: -524255.612409
EM: Round [47] log likelihood: -524255.609228
EM: Round [48] log likelihood: -524255.606320
EM: Round [49] log likelihood: -524255.603660
EM: Round [50] log likelihood: -524255.601223
EM: Round [51] log likelihood: -524255.598989
EM: Round [52] log likelihood: -524255.596939
EM: Round [53] log likelihood: -524255.595056
EM: Round [54] log likelihood: -524255.593324
EM: Round [55] log likelihood: -524255.591731
EM: Round [56] log likelihood: -524255.590264
EM: Round [57] log likelihood: -524255.588912
EM: Round [58] log likelihood: -524255.587665
EM: Round [59] log likelihood: -524255.586515
EM: Round [60] log likelihood: -524255.585452
EM: Round [61] log likelihood: -524255.584470
EM: Round [62] log likelihood: -524255.583563
EM: Round [63] log likelihood: -524255.582723
EM: Round [64] log likelihood: -524255.581945
EM: Round [65] log likelihood: -524255.581225
EM: Round [66] log likelihood: -524255.580558
EM: Round [67] log likelihood: -524255.579940
EM: Round [68] log likelihood: -524255.579366
EM: Round [69] log likelihood: -524255.578834
EM: Round [70] log likelihood: -524255.578340
EM: Round [71] log likelihood: -524255.577881
EM: Round [72] log likelihood: -524255.577455
EM: Round [73] log likelihood: -524255.577059
EM: Round [74] log likelihood: -524255.576691
EM: Round [75] log likelihood: -524255.576348
EM: Round [76] log likelihood: -524255.576029
EM: Round [77] log likelihood: -524255.575733
EM: Round [78] log likelihood: -524255.575457
EM: Round [79] log likelihood: -524255.575200
EM: Round [80] log likelihood: -524255.574960
EM: Round [81] log likelihood: -524255.574737
EM: Round [82] log likelihood: -524255.574529
EM: Round [83] log likelihood: -524255.574335
EM: Round [84] log likelihood: -524255.574154
EM: Round [85] log likelihood: -524255.573985
EM: Round [86] log likelihood: -524255.573828
EM: Round [87] log likelihood: -524255.573681
EM: Round [88] log likelihood: -524255.573544
EM: Round [89] log likelihood: -524255.573416
EM: Round [90] log likelihood: -524255.573296
EM: Round [91] log likelihood: -524255.573185
EM: Round [92] log likelihood: -524255.573080
EM: Round [93] log likelihood: -524255.572983
EM: Stopping iterations at round 93 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 194210175 > /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir > /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir --annotate /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir
-done, see /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2337, filtered: 12565)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.b2I8qhsNwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.b2I8qhsNwL/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000239268.3]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000266931.2]
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WARNING, no entry stored in dbm for [ENSG00000236523.2]
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WARNING, no entry stored in dbm for [ENSG00000277125.1]
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WARNING, no entry stored in dbm for [ENSG00000215302.8]
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WARNING, no entry stored in dbm for [ENSG00000269032.1]
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WARNING, no entry stored in dbm for [ENSG00000268416.1]
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WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000241490.1]
WARNING, no entry stored in dbm for [ENSG00000249201.2]
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WARNING, no entry stored in dbm for [ENSG00000214189.9]
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WARNING, no entry stored in dbm for [ENSG00000277977.1]
WARNING, no entry stored in dbm for [ENSG00000235531.11]
WARNING, no entry stored in dbm for [ENSG00000226803.9]
WARNING, no entry stored in dbm for [ENSG00000233987.2]
WARNING, no entry stored in dbm for [ENSG00000213742.7]
WARNING, no entry stored in dbm for [ENSG00000219368.3]
WARNING, no entry stored in dbm for [ENSG00000285331.2]
WARNING, no entry stored in dbm for [ENSG00000285331.2]
WARNING, no entry stored in dbm for [ENSG00000224743.7]
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WARNING, no entry stored in dbm for [ENSG00000226471.6]
WARNING, no entry stored in dbm for [ENSG00000226471.6]
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WARNING, no entry stored in dbm for [ENSG00000269839.1]
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WARNING, no entry stored in dbm for [ENSG00000183506.17]
WARNING, no entry stored in dbm for [ENSG00000276141.4]
WARNING, no entry stored in dbm for [ENSG00000274536.7]
WARNING, no entry stored in dbm for [ENSG00000231365.6]
WARNING, no entry stored in dbm for [ENSG00000285881.1]
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WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000286572.1]
WARNING, no entry stored in dbm for [ENSG00000280434.1]
WARNING, no entry stored in dbm for [ENSG00000274294.1]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000237529.2]
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WARNING, no entry stored in dbm for [ENSG00000239665.8]
WARNING, no entry stored in dbm for [ENSG00000108442.2]
WARNING, no entry stored in dbm for [ENSG00000214176.9]
WARNING, no entry stored in dbm for [ENSG00000176728.10]
WARNING, no entry stored in dbm for [ENSG00000198054.12]
WARNING, no entry stored in dbm for [ENSG00000131401.11]
WARNING, no entry stored in dbm for [ENSG00000219699.2]
WARNING, no entry stored in dbm for [ENSG00000236130.2]
WARNING, no entry stored in dbm for [ENSG00000247809.9]
WARNING, no entry stored in dbm for [ENSG00000258982.1]
WARNING, no entry stored in dbm for [ENSG00000268093.1]
WARNING, no entry stored in dbm for [ENSG00000093100.13]
WARNING, no entry stored in dbm for [ENSG00000287665.1]
WARNING, no entry stored in dbm for [ENSG00000170827.9]
WARNING, no entry stored in dbm for [ENSG00000287454.1]
WARNING, no entry stored in dbm for [ENSG00000257210.1]
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WARNING, no entry stored in dbm for [ENSG00000284977.2]
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WARNING, no entry stored in dbm for [ENSG00000200463.1]
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WARNING, no entry stored in dbm for [ENSG00000271434.3]
WARNING, no entry stored in dbm for [ENSG00000235833.1]
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WARNING, no entry stored in dbm for [ENSG00000224966.4]
WARNING, no entry stored in dbm for [ENSG00000259977.1]
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WARNING, no entry stored in dbm for [ENSG00000253639.1]
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WARNING, no entry stored in dbm for [ENSG00000230406.2]
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WARNING, no entry stored in dbm for [ENSG00000286829.1]
WARNING, no entry stored in dbm for [ENSG00000237223.6]
WARNING, no entry stored in dbm for [ENSG00000248660.1]
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WARNING, no entry stored in dbm for [ENSG00000226715.4]
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WARNING, no entry stored in dbm for [ENSG00000260409.1]
WARNING, no entry stored in dbm for [ENSG00000212464.1]
WARNING, no entry stored in dbm for [ENSG00000203875.13]
WARNING, no entry stored in dbm for [ENSG00000175061.18]
WARNING, no entry stored in dbm for [ENSG00000255717.7]
WARNING, no entry stored in dbm for [ENSG00000225521.1]
WARNING, no entry stored in dbm for [ENSG00000287763.1]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000287468.1]
WARNING, no entry stored in dbm for [ENSG00000279092.1]
WARNING, no entry stored in dbm for [ENSG00000224081.9]
WARNING, no entry stored in dbm for [ENSG00000286953.1]
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WARNING, no entry stored in dbm for [ENSG00000270020.1]
WARNING, no entry stored in dbm for [ENSG00000251015.1]
WARNING, no entry stored in dbm for [ENSG00000251138.7]
WARNING, no entry stored in dbm for [ENSG00000236501.6]
WARNING, no entry stored in dbm for [ENSG00000226419.8]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000235583.2]
WARNING, no entry stored in dbm for [ENSG00000284130.1]
WARNING, no entry stored in dbm for [ENSG00000223750.1]
WARNING, no entry stored in dbm for [ENSG00000223750.1]
WARNING, no entry stored in dbm for [ENSG00000275665.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000274525.1]
WARNING, no entry stored in dbm for [ENSG00000200331.1]
WARNING, no entry stored in dbm for [ENSG00000247950.7]
WARNING, no entry stored in dbm for [ENSG00000231312.7]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000285077.2]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000287882.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000162840.4]
WARNING, no entry stored in dbm for [ENSG00000060303.5]
WARNING, no entry stored in dbm for [ENSG00000217067.2]
WARNING, no entry stored in dbm for [ENSG00000176124.15]
WARNING, no entry stored in dbm for [ENSG00000242071.3]
WARNING, no entry stored in dbm for [ENSG00000242071.3]
WARNING, no entry stored in dbm for [ENSG00000220370.1]
WARNING, no entry stored in dbm for [ENSG00000226448.1]
WARNING, no entry stored in dbm for [ENSG00000242071.3]
WARNING, no entry stored in dbm for [ENSG00000270446.1]
WARNING, no entry stored in dbm for [ENSG00000231416.1]
WARNING, no entry stored in dbm for [ENSG00000233541.4]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000241081.1]
WARNING, no entry stored in dbm for [ENSG00000234559.1]
WARNING, no entry stored in dbm for [ENSG00000242941.1]
WARNING, no entry stored in dbm for [ENSG00000204194.1]
WARNING, no entry stored in dbm for [ENSG00000242423.2]
WARNING, no entry stored in dbm for [ENSG00000199849.1]
WARNING, no entry stored in dbm for [ENSG00000222414.1]
WARNING, no entry stored in dbm for [ENSG00000249373.2]
WARNING, no entry stored in dbm for [ENSG00000244544.2]
WARNING, no entry stored in dbm for [ENSG00000231259.5]
WARNING, no entry stored in dbm for [ENSG00000236882.8]
WARNING, no entry stored in dbm for [ENSG00000255095.2]
WARNING, no entry stored in dbm for [ENSG00000232104.3]
WARNING, no entry stored in dbm for [ENSG00000088340.17]
WARNING, no entry stored in dbm for [ENSG00000275011.1]
WARNING, no entry stored in dbm for [ENSG00000229419.1]
WARNING, no entry stored in dbm for [ENSG00000235777.1]
WARNING, no entry stored in dbm for [ENSG00000259422.1]
WARNING, no entry stored in dbm for [ENSG00000255857.6]
WARNING, no entry stored in dbm for [ENSG00000233792.3]
WARNING, no entry stored in dbm for [ENSG00000248215.6]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000253927.1]
WARNING, no entry stored in dbm for [ENSG00000230487.8]
WARNING, no entry stored in dbm for [ENSG00000178055.13]
WARNING, no entry stored in dbm for [ENSG00000236116.1]
WARNING, no entry stored in dbm for [ENSG00000255794.9]
WARNING, no entry stored in dbm for [ENSG00000250842.1]
WARNING, no entry stored in dbm for [ENSG00000233442.2]
WARNING, no entry stored in dbm for [ENSG00000221817.10]
WARNING, no entry stored in dbm for [ENSG00000254285.3]
WARNING, no entry stored in dbm for [ENSG00000213904.9]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000127957.18]
WARNING, no entry stored in dbm for [ENSG00000223779.6]
WARNING, no entry stored in dbm for [ENSG00000228546.2]
WARNING, no entry stored in dbm for [ENSG00000250778.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000226648.2]
WARNING, no entry stored in dbm for [ENSG00000232913.8]
WARNING, no entry stored in dbm for [ENSG00000250848.1]
WARNING, no entry stored in dbm for [ENSG00000280109.3]
WARNING, no entry stored in dbm for [ENSG00000225647.2]
WARNING, no entry stored in dbm for [ENSG00000154898.15]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000229009.7]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000287037.1]
WARNING, no entry stored in dbm for [ENSG00000269318.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000233997.5]
WARNING, no entry stored in dbm for [ENSG00000179170.11]
WARNING, no entry stored in dbm for [ENSG00000237272.2]
WARNING, no entry stored in dbm for [ENSG00000229151.2]
WARNING, no entry stored in dbm for [ENSG00000223705.9]
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [ENSG00000225377.6]
WARNING, no entry stored in dbm for [ENSG00000225964.6]
WARNING, no entry stored in dbm for [ENSG00000226232.8]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000236991.6]
WARNING, no entry stored in dbm for [ENSG00000256346.1]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000270231.4]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000254759.1]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000249119.1]
WARNING, no entry stored in dbm for [ENSG00000237711.1]
WARNING, no entry stored in dbm for [ENSG00000282924.1]
WARNING, no entry stored in dbm for [ENSG00000254101.7]
WARNING, no entry stored in dbm for [ENSG00000234801.3]
WARNING, no entry stored in dbm for [ENSG00000234801.3]
WARNING, no entry stored in dbm for [ENSG00000260276.2]
WARNING, no entry stored in dbm for [ENSG00000288584.1]
WARNING, no entry stored in dbm for [ENSG00000215386.13]
WARNING, no entry stored in dbm for [ENSG00000239257.1]
WARNING, no entry stored in dbm for [ENSG00000258479.6]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [ENSG00000187893.10]
WARNING, no entry stored in dbm for [ENSG00000228503.1]
WARNING, no entry stored in dbm for [ENSG00000232709.1]
WARNING, no entry stored in dbm for [ENSG00000231312.7]
WARNING, no entry stored in dbm for [ENSG00000271475.1]
WARNING, no entry stored in dbm for [ENSG00000205622.11]
WARNING, no entry stored in dbm for [ENSG00000286295.1]
WARNING, no entry stored in dbm for [ENSG00000204706.14]
WARNING, no entry stored in dbm for [ENSG00000228536.3]
WARNING, no entry stored in dbm for [ENSG00000227252.2]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000283196.2]
WARNING, no entry stored in dbm for [ENSG00000143429.10]
WARNING, no entry stored in dbm for [ENSG00000267348.3]
WARNING, no entry stored in dbm for [ENSG00000264235.6]
WARNING, no entry stored in dbm for [ENSG00000228412.9]
WARNING, no entry stored in dbm for [ENSG00000251513.2]
WARNING, no entry stored in dbm for [ENSG00000224535.2]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000215241.4]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000250754.6]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000204650.14]
WARNING, no entry stored in dbm for [ENSG00000254101.7]
WARNING, no entry stored in dbm for [ENSG00000225742.6]
WARNING, no entry stored in dbm for [ENSG00000225742.6]
WARNING, no entry stored in dbm for [ENSG00000226715.4]
WARNING, no entry stored in dbm for [ENSG00000234323.8]
WARNING, no entry stored in dbm for [ENSG00000237877.7]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000244128.7]
WARNING, no entry stored in dbm for [ENSG00000228262.10]
WARNING, no entry stored in dbm for [ENSG00000235437.8]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000281162.2]
WARNING, no entry stored in dbm for [ENSG00000241769.7]
WARNING, no entry stored in dbm for [ENSG00000241769.7]
WARNING, no entry stored in dbm for [ENSG00000215190.9]
WARNING, no entry stored in dbm for [ENSG00000215190.9]
WARNING, no entry stored in dbm for [ENSG00000232677.9]
WARNING, no entry stored in dbm for [ENSG00000205181.7]
WARNING, no entry stored in dbm for [ENSG00000228221.6]
WARNING, no entry stored in dbm for [ENSG00000224511.2]
WARNING, no entry stored in dbm for [ENSG00000227456.9]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000234936.1]
WARNING, no entry stored in dbm for [ENSG00000283235.2]
WARNING, no entry stored in dbm for [ENSG00000250778.1]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000265480.5]
WARNING, no entry stored in dbm for [ENSG00000230832.3]
WARNING, no entry stored in dbm for [ENSG00000231160.10]
WARNING, no entry stored in dbm for [ENSG00000263934.5]
WARNING, no entry stored in dbm for [ENSG00000237876.1]
WARNING, no entry stored in dbm for [ENSG00000226232.8]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000253647.1]
WARNING, no entry stored in dbm for [ENSG00000284728.1]
WARNING, no entry stored in dbm for [ENSG00000252760.1]
WARNING, no entry stored in dbm for [ENSG00000229119.3]
WARNING, no entry stored in dbm for [ENSG00000271646.1]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000271443.1]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000258346.1]
WARNING, no entry stored in dbm for [ENSG00000274044.5]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000231711.2]
WARNING, no entry stored in dbm for [ENSG00000256557.1]
WARNING, no entry stored in dbm for [ENSG00000255750.6]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000251102.1]
WARNING, no entry stored in dbm for [ENSG00000233299.1]
WARNING, no entry stored in dbm for [ENSG00000280809.4]
WARNING, no entry stored in dbm for [ENSG00000180229.12]
WARNING, no entry stored in dbm for [ENSG00000259307.1]
WARNING, no entry stored in dbm for [ENSG00000228223.3]
WARNING, no entry stored in dbm for [ENSG00000270071.3]
WARNING, no entry stored in dbm for [ENSG00000251005.1]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000233910.1]
WARNING, no entry stored in dbm for [ENSG00000283001.2]
WARNING, no entry stored in dbm for [ENSG00000225083.2]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000260409.1]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000259072.2]
WARNING, no entry stored in dbm for [ENSG00000272396.1]
WARNING, no entry stored in dbm for [ENSG00000278434.1]
WARNING, no entry stored in dbm for [ENSG00000235280.2]
WARNING, no entry stored in dbm for [ENSG00000237975.7]
WARNING, no entry stored in dbm for [ENSG00000230316.7]
WARNING, no entry stored in dbm for [ENSG00000088340.17]
WARNING, no entry stored in dbm for [ENSG00000218475.2]
WARNING, no entry stored in dbm for [ENSG00000229321.2]
WARNING, no entry stored in dbm for [ENSG00000224074.3]
WARNING, no entry stored in dbm for [ENSG00000266373.1]
WARNING, no entry stored in dbm for [ENSG00000228434.1]
WARNING, no entry stored in dbm for [ENSG00000243355.1]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000200554.1]
WARNING, no entry stored in dbm for [ENSG00000250274.2]
WARNING, no entry stored in dbm for [ENSG00000251842.1]
WARNING, no entry stored in dbm for [ENSG00000201852.1]
WARNING, no entry stored in dbm for [ENSG00000285639.1]
WARNING, no entry stored in dbm for [ENSG00000258454.1]
WARNING, no entry stored in dbm for [ENSG00000287998.1]
WARNING, no entry stored in dbm for [ENSG00000264044.1]
WARNING, no entry stored in dbm for [ENSG00000224032.7]
WARNING, no entry stored in dbm for [ENSG00000231137.1]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000234152.1]
WARNING, no entry stored in dbm for [ENSG00000218027.2]
WARNING, no entry stored in dbm for [ENSG00000220505.2]
WARNING, no entry stored in dbm for [ENSG00000230239.1]
WARNING, no entry stored in dbm for [ENSG00000250980.1]
WARNING, no entry stored in dbm for [ENSG00000206573.9]
WARNING, no entry stored in dbm for [ENSG00000244692.3]
WARNING, no entry stored in dbm for [ENSG00000239224.3]
WARNING, no entry stored in dbm for [ENSG00000243426.3]
WARNING, no entry stored in dbm for [ENSG00000248079.3]
WARNING, no entry stored in dbm for [ENSG00000174407.13]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000280432.1]
WARNING, no entry stored in dbm for [ENSG00000250585.3]
WARNING, no entry stored in dbm for [ENSG00000235257.9]
WARNING, no entry stored in dbm for [ENSG00000213045.3]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000231890.8]
WARNING, no entry stored in dbm for [ENSG00000285796.1]
WARNING, no entry stored in dbm for [ENSG00000235244.4]
WARNING, no entry stored in dbm for [ENSG00000235244.4]
WARNING, no entry stored in dbm for [ENSG00000251459.2]
WARNING, no entry stored in dbm for [ENSG00000267519.6]
WARNING, no entry stored in dbm for [ENSG00000189332.5]
WARNING, no entry stored in dbm for [ENSG00000239415.1]
WARNING, no entry stored in dbm for [ENSG00000257913.2]
WARNING, no entry stored in dbm for [ENSG00000249026.2]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000196810.5]
WARNING, no entry stored in dbm for [ENSG00000271711.1]
WARNING, no entry stored in dbm for [ENSG00000229595.1]
WARNING, no entry stored in dbm for [ENSG00000250391.1]
WARNING, no entry stored in dbm for [ENSG00000225172.6]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000236795.1]
WARNING, no entry stored in dbm for [ENSG00000269937.1]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000254285.3]
WARNING, no entry stored in dbm for [ENSG00000224216.1]
WARNING, no entry stored in dbm for [ENSG00000267506.5]
WARNING, no entry stored in dbm for [ENSG00000247572.8]
WARNING, no entry stored in dbm for [ENSG00000281207.1]
WARNING, no entry stored in dbm for [ENSG00000204904.7]
WARNING, no entry stored in dbm for [ENSG00000214081.8]
WARNING, no entry stored in dbm for [ENSG00000244161.1]
WARNING, no entry stored in dbm for [ENSG00000184068.2]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000279296.1]
WARNING, no entry stored in dbm for [ENSG00000223773.7]
WARNING, no entry stored in dbm for [ENSG00000243016.1]
WARNING, no entry stored in dbm for [ENSG00000215039.7]
WARNING, no entry stored in dbm for [ENSG00000223478.1]
WARNING, no entry stored in dbm for [ENSG00000284663.1]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000279249.3]
WARNING, no entry stored in dbm for [ENSG00000215386.13]
WARNING, no entry stored in dbm for [ENSG00000261644.2]
WARNING, no entry stored in dbm for [ENSG00000239521.9]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000275014.1]
WARNING, no entry stored in dbm for [ENSG00000225417.1]
WARNING, no entry stored in dbm for [ENSG00000236453.5]
WARNING, no entry stored in dbm for [ENSG00000255202.1]
WARNING, no entry stored in dbm for [ENSG00000285417.1]
WARNING, no entry stored in dbm for [ENSG00000285417.1]
WARNING, no entry stored in dbm for [ENSG00000259520.6]
WARNING, no entry stored in dbm for [ENSG00000286156.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000251079.6]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000286619.1]
WARNING, no entry stored in dbm for [ENSG00000227883.1]
WARNING, no entry stored in dbm for [ENSG00000260157.3]
WARNING, no entry stored in dbm for [ENSG00000224729.6]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000229498.1]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000177410.13]
WARNING, no entry stored in dbm for [ENSG00000244723.3]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000264281.3]
WARNING, no entry stored in dbm for [ENSG00000245148.2]
WARNING, no entry stored in dbm for [ENSG00000287041.1]
WARNING, no entry stored in dbm for [ENSG00000278330.1]
WARNING, no entry stored in dbm for [ENSG00000245970.2]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000218536.1]
WARNING, no entry stored in dbm for [ENSG00000254461.1]
WARNING, no entry stored in dbm for [ENSG00000247137.9]
WARNING, no entry stored in dbm for [ENSG00000226043.2]
WARNING, no entry stored in dbm for [ENSG00000284128.1]
WARNING, no entry stored in dbm for [ENSG00000231355.1]
WARNING, no entry stored in dbm for [ENSG00000188399.5]
WARNING, no entry stored in dbm for [ENSG00000282924.1]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000236564.1]
WARNING, no entry stored in dbm for [ENSG00000231259.5]
WARNING, no entry stored in dbm for [ENSG00000237666.2]
WARNING, no entry stored in dbm for [ENSG00000232601.1]
WARNING, no entry stored in dbm for [ENSG00000234200.2]
WARNING, no entry stored in dbm for [ENSG00000235085.3]
WARNING, no entry stored in dbm for [ENSG00000231964.1]
WARNING, no entry stored in dbm for [ENSG00000235381.1]
WARNING, no entry stored in dbm for [ENSG00000218418.2]
WARNING, no entry stored in dbm for [ENSG00000259998.1]
WARNING, no entry stored in dbm for [ENSG00000271860.7]
WARNING, no entry stored in dbm for [ENSG00000238260.1]
WARNING, no entry stored in dbm for [ENSG00000272672.1]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000235582.2]
WARNING, no entry stored in dbm for [ENSG00000215016.2]
WARNING, no entry stored in dbm for [ENSG00000235605.1]
WARNING, no entry stored in dbm for [ENSG00000264177.1]
WARNING, no entry stored in dbm for [ENSG00000224025.2]
WARNING, no entry stored in dbm for [ENSG00000285424.1]
WARNING, no entry stored in dbm for [ENSG00000288583.1]
WARNING, no entry stored in dbm for [ENSG00000287368.1]
WARNING, no entry stored in dbm for [ENSG00000229019.1]
WARNING, no entry stored in dbm for [ENSG00000284986.1]
WARNING, no entry stored in dbm for [ENSG00000226987.1]
WARNING, no entry stored in dbm for [ENSG00000136149.6]
WARNING, no entry stored in dbm for [ENSG00000233183.3]
WARNING, no entry stored in dbm for [ENSG00000278784.1]
WARNING, no entry stored in dbm for [ENSG00000280129.1]
WARNING, no entry stored in dbm for [ENSG00000277425.1]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000232310.8]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000241354.2]
WARNING, no entry stored in dbm for [ENSG00000214535.3]
WARNING, no entry stored in dbm for [ENSG00000231113.2]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000280434.1]
WARNING, no entry stored in dbm for [ENSG00000219553.2]
WARNING, no entry stored in dbm for [ENSG00000272836.1]
WARNING, no entry stored in dbm for [ENSG00000230912.1]
WARNING, no entry stored in dbm for [ENSG00000285646.2]
WARNING, no entry stored in dbm for [ENSG00000280604.1]
WARNING, no entry stored in dbm for [ENSG00000233955.1]
WARNING, no entry stored in dbm for [ENSG00000198221.10]
WARNING, no entry stored in dbm for [ENSG00000259904.1]
WARNING, no entry stored in dbm for [ENSG00000286100.1]
WARNING, no entry stored in dbm for [ENSG00000223804.5]
WARNING, no entry stored in dbm for [ENSG00000223779.6]
WARNING, no entry stored in dbm for [ENSG00000279047.4]
WARNING, no entry stored in dbm for [ENSG00000283453.2]
WARNING, no entry stored in dbm for [ENSG00000275431.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000283752.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000261760.8]
WARNING, no entry stored in dbm for [ENSG00000267924.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000214135.8]
WARNING, no entry stored in dbm for [ENSG00000228205.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000260577.2]
WARNING, no entry stored in dbm for [ENSG00000236722.1]
WARNING, no entry stored in dbm for [ENSG00000278791.1]
WARNING, no entry stored in dbm for [ENSG00000260066.1]
WARNING, no entry stored in dbm for [ENSG00000259945.1]
WARNING, no entry stored in dbm for [ENSG00000253235.2]
WARNING, no entry stored in dbm for [ENSG00000249951.1]
WARNING, no entry stored in dbm for [ENSG00000248637.1]
WARNING, no entry stored in dbm for [ENSG00000288055.1]
WARNING, no entry stored in dbm for [ENSG00000244669.1]
WARNING, no entry stored in dbm for [ENSG00000241770.1]
WARNING, no entry stored in dbm for [ENSG00000254285.3]
WARNING, no entry stored in dbm for [ENSG00000254035.1]
WARNING, no entry stored in dbm for [ENSG00000253144.1]
WARNING, no entry stored in dbm for [ENSG00000286436.1]
WARNING, no entry stored in dbm for [ENSG00000228327.3]
WARNING, no entry stored in dbm for [ENSG00000285783.1]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000228919.5]
WARNING, no entry stored in dbm for [ENSG00000248551.1]
WARNING, no entry stored in dbm for [ENSG00000286494.1]
WARNING, no entry stored in dbm for [ENSG00000234716.1]
WARNING, no entry stored in dbm for [ENSG00000251391.5]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000259185.1]
WARNING, no entry stored in dbm for [ENSG00000285654.1]
WARNING, no entry stored in dbm for [ENSG00000287042.1]
WARNING, no entry stored in dbm for [ENSG00000265943.1]
WARNING, no entry stored in dbm for [ENSG00000259231.2]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000274565.1]
WARNING, no entry stored in dbm for [ENSG00000284627.1]
WARNING, no entry stored in dbm for [ENSG00000255319.5]
WARNING, no entry stored in dbm for [ENSG00000258172.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000287388.1]
WARNING, no entry stored in dbm for [ENSG00000247765.2]
WARNING, no entry stored in dbm for [ENSG00000258590.5]
WARNING, no entry stored in dbm for [ENSG00000275157.1]
WARNING, no entry stored in dbm for [ENSG00000254859.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000267632.1]
WARNING, no entry stored in dbm for [ENSG00000239828.7]
WARNING, no entry stored in dbm for [ENSG00000259299.1]
WARNING, no entry stored in dbm for [ENSG00000197320.5]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000254230.1]
WARNING, no entry stored in dbm for [ENSG00000261386.2]
WARNING, no entry stored in dbm for [ENSG00000256734.1]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000258732.1]
WARNING, no entry stored in dbm for [ENSG00000180229.12]
WARNING, no entry stored in dbm for [ENSG00000214980.4]
WARNING, no entry stored in dbm for [ENSG00000253361.3]
WARNING, no entry stored in dbm for [ENSG00000250764.1]
WARNING, no entry stored in dbm for [ENSG00000255621.1]
WARNING, no entry stored in dbm for [ENSG00000253704.2]
WARNING, no entry stored in dbm for [ENSG00000253636.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000272267.2]
WARNING, no entry stored in dbm for [ENSG00000249863.2]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000270820.6]
WARNING, no entry stored in dbm for [ENSG00000224731.1]
WARNING, no entry stored in dbm for [ENSG00000261329.6]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000267640.6]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000267800.1]
WARNING, no entry stored in dbm for [ENSG00000235424.1]
WARNING, no entry stored in dbm for [ENSG00000268573.1]
WARNING, no entry stored in dbm for [ENSG00000254362.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000268650.3]
WARNING, no entry stored in dbm for [ENSG00000237798.1]
WARNING, no entry stored in dbm for [ENSG00000259408.2]
WARNING, no entry stored in dbm for [ENSG00000231332.2]
WARNING, no entry stored in dbm for [ENSG00000259408.2]
WARNING, no entry stored in dbm for [ENSG00000226125.2]
WARNING, no entry stored in dbm for [ENSG00000277977.1]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000234352.9]
WARNING, no entry stored in dbm for [ENSG00000260228.6]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000240388.2]
WARNING, no entry stored in dbm for [ENSG00000178715.8]
WARNING, no entry stored in dbm for [ENSG00000268309.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000269086.3]
WARNING, no entry stored in dbm for [ENSG00000287859.1]
WARNING, no entry stored in dbm for [ENSG00000244161.1]
WARNING, no entry stored in dbm for [ENSG00000274525.1]
WARNING, no entry stored in dbm for [ENSG00000230092.7]
WARNING, no entry stored in dbm for [ENSG00000248103.1]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000244657.1]
WARNING, no entry stored in dbm for [ENSG00000257261.6]
WARNING, no entry stored in dbm for [ENSG00000255655.1]
WARNING, no entry stored in dbm for [ENSG00000223813.3]
WARNING, no entry stored in dbm for [ENSG00000234718.7]
WARNING, no entry stored in dbm for [ENSG00000243265.1]
WARNING, no entry stored in dbm for [ENSG00000267575.7]
WARNING, no entry stored in dbm for [ENSG00000236531.2]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000288546.1]
WARNING, no entry stored in dbm for [ENSG00000274705.2]
WARNING, no entry stored in dbm for [ENSG00000250332.1]
WARNING, no entry stored in dbm for [ENSG00000238063.3]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000199568.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.b2I8qhsNwL/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)