File Info
- Filename
- aih-tih-sc-cece97-R1_A23YTGFLT4_1.fusions.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/10/e32cf3187a6ccdbe47d8abab038365/aih-tih-sc-cece97-R1_A23YTGFLT4_1.fusions.csv
- Size
- 2.0 KB
- Task
- NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (aih-tih-sc-cece97-R1_A23YTGFLT4_1)
- Attempt
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| TLK2P1--AC110079.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:34039043:-#chr4:118595912:+,junction_reads: 22,spanning_reads: 0,ffmp: 0.066 | ||
| PRSS27--TPSB2 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr16:2713529:-#chr16:1228814:-,junction_reads: 20,spanning_reads: 0,ffmp: 0.0603 | |
| TLK2--LINC01347 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:62560126:+#chr1:243097299:-,junction_reads: 17,spanning_reads: 0,ffmp: 0.0395 | ||
| COL1A1--SLC45A4 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:50189867:-#chr8:141254178:-,junction_reads: 10,spanning_reads: 0,ffmp: 0.0337 | ||
| SIRT2--CAPN12 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr19:38899506:-#chr19:38742528:-,junction_reads: 9,spanning_reads: 0,ffmp: 0.0304 | ||
| STX16--NPEPL1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr20:58673711#chr20:58691724,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 91,split_reads2: 67,discordant_mates: 0,coverage1: 2479,coverage2: 781,confidence: high | ||
| TVP23C--CDRT4 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr17:15503098#chr17:15440285,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 36,split_reads2: 26,discordant_mates: 0,coverage1: 965,coverage2: 266,confidence: high | |
| GTF2A1L--STON1-GTF2A1L | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr2:48671680#chr2:48776280,reading-frame: .,type: deletion/read-through,split_reads1: 10,split_reads2: 3,discordant_mates: 0,coverage1: 325,coverage2: 135,confidence: high | ||
| AP001347.1--ANKRD20A11P | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr21:14027597#chr21:13954147,reading-frame: .,type: inversion,split_reads1: 5,split_reads2: 5,discordant_mates: 0,coverage1: 1043,coverage2: 134,confidence: high | ||
| SDHDP6--TEX12 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:25294330#chr11:112170419,reading-frame: .,type: translocation,split_reads1: 2,split_reads2: 6,discordant_mates: 0,coverage1: 369,coverage2: 182,confidence: high |
11 rows