File Info
- Filename
- aih-tih-sc-5ceb9a-R1_A23YTGFLT4_1.fusions.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/819acdb7d8d4ed88e481d8f86d1620/aih-tih-sc-5ceb9a-R1_A23YTGFLT4_1.fusions.csv
- Size
- 22.2 KB
- Task
- NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (aih-tih-sc-5ceb9a-R1_A23YTGFLT4_1)
- Attempt
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| FSIP1--AC013652.1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr15:39600845#chr15:39071608,reading-frame: .,type: deletion,split_reads1: 173,split_reads2: 27,discordant_mates: 14,coverage1: 6040,coverage2: 74,confidence: high | position: chr15:39600845:-#chr15:39071608:-,junction_reads: 207,spanning_reads: 15,ffmp: 0.7555 | |
| SGSH--SKAP1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr17:80220226#chr17:48346006,reading-frame: in-frame,type: deletion,split_reads1: 119,split_reads2: 63,discordant_mates: 0,coverage1: 2493,coverage2: 1049,confidence: high | position: chr17:80220226:-#chr17:48346006:-,junction_reads: 194,spanning_reads: 0,ffmp: 0.6801 | |
| DDX42--PECAM1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr17:63818630#chr17:64370025,reading-frame: .,type: inversion,split_reads1: 37,split_reads2: 113,discordant_mates: 10,coverage1: 101,coverage2: 2400,confidence: high | position: chr17:63818630:+#chr17:64370025:-,junction_reads: 151,spanning_reads: 10,ffmp: 0.5645 | |
| CYTH1--TBC1D16 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr17:78782202#chr17:79952818,reading-frame: out-of-frame,type: duplication,split_reads1: 13,split_reads2: 47,discordant_mates: 0,coverage1: 728,coverage2: 2505,confidence: high | position: chr17:78782202:-#chr17:79952818:-,junction_reads: 60,spanning_reads: 0,ffmp: 0.2103 | |
| NF1--ABCA9-AS1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr17:31095369#chr17:69011983,reading-frame: out-of-frame,type: deletion,split_reads1: 19,split_reads2: 30,discordant_mates: 1,coverage1: 5784,coverage2: 930,confidence: high | position: chr17:31095369:+#chr17:69011983:+,junction_reads: 55,spanning_reads: 1,ffmp: 0.0982 | |
| TBC1D16--NSFP1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr17:80010160#chr17:46487045,reading-frame: out-of-frame,type: inversion,split_reads1: 21,split_reads2: 28,discordant_mates: 1,coverage1: 1896,coverage2: 603,confidence: high | position: chr17:80010160:-#chr17:46487045:+,junction_reads: 42,spanning_reads: 0,ffmp: 0.1459 | |
| TLK2--FAM157A | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:62560126:+#chr3:198180755:+,junction_reads: 25,spanning_reads: 1,ffmp: 0.0434 | ||
| STXBP4--CASC17 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr17:55047154#chr17:71185655,reading-frame: out-of-frame,type: inversion,split_reads1: 23,split_reads2: 0,discordant_mates: 1,coverage1: 546,coverage2: 2,confidence: high | position: chr17:55047154:+#chr17:71185655:-,junction_reads: 23,spanning_reads: 1,ffmp: 0.0841 | |
| TLK2P1--AC110079.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:34039043:-#chr4:118595912:+,junction_reads: 20,spanning_reads: 0,ffmp: 0.0641 | ||
| UBE2Q2P1--GOLGA6L10 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr15:84526781:-#chr15:82347629:-,junction_reads: 15,spanning_reads: 0,ffmp: 0.0526 | ||
| CCDC196--GPHN | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr14:66492194:+#chr14:66681107:+,junction_reads: 15,spanning_reads: 3,ffmp: 0.0594 | ||
| STX16--NPEPL1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr20:58673711#chr20:58691724,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 122,split_reads2: 122,discordant_mates: 7,coverage1: 2952,coverage2: 719,confidence: high | position: chr20:58673711:+#chr20:58691724:+,junction_reads: 13,spanning_reads: 0,ffmp: 0.0456 | |
| ZFP36L1--IGH-@-ext | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr14:68792882:-#chr14:105862211:+,junction_reads: 12,spanning_reads: 0,ffmp: 0.0421 | ||
| FBXO25--AC240565.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr8:435707:+#chr17:106864:-,junction_reads: 9,spanning_reads: 0,ffmp: 0.007 | ||
| NF1--ABCA8 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:31095369#chr17:68917396,reading-frame: out-of-frame,type: deletion/5'-5',split_reads1: 205,split_reads2: 229,discordant_mates: 4,coverage1: 5784,coverage2: 1096,confidence: high | ||
| VTCN1--VTCN1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:117225109#chr1:117170171,reading-frame: .,type: deletion/read-through,split_reads1: 84,split_reads2: 300,discordant_mates: 2,coverage1: 1088,coverage2: 4656,confidence: high | ||
| Metazoa_SRP--VTCN1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:117225109#chr1:117170171,reading-frame: .,type: deletion/read-through,split_reads1: 84,split_reads2: 300,discordant_mates: 2,coverage1: 1088,coverage2: 4656,confidence: high | ||
| PCDHA4--PCDHAC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140809572#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 112,split_reads2: 183,discordant_mates: 4,coverage1: 1005,coverage2: 1483,confidence: high | ||
| PCDHA4--PCDHAC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140809572#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 112,split_reads2: 183,discordant_mates: 4,coverage1: 1005,coverage2: 1483,confidence: high | ||
| PCDHA4--PCDHA13 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140809572#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 112,split_reads2: 183,discordant_mates: 4,coverage1: 1005,coverage2: 1483,confidence: high | ||
| PCDHGB2--PCDHGA8 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 188,split_reads2: 97,discordant_mates: 2,coverage1: 1132,coverage2: 11154,confidence: high | ||
| PCDHGB2--PCDHGB6 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 188,split_reads2: 97,discordant_mates: 2,coverage1: 1132,coverage2: 11154,confidence: high | ||
| PCDHGB2--PCDHGA10 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 188,split_reads2: 97,discordant_mates: 2,coverage1: 1132,coverage2: 11154,confidence: high | ||
| PCDHGB2--PCDHGC5 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 188,split_reads2: 97,discordant_mates: 2,coverage1: 1132,coverage2: 11154,confidence: high | ||
| PCDHGB2--PCDHGC4 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 188,split_reads2: 97,discordant_mates: 2,coverage1: 1132,coverage2: 11154,confidence: high | ||
| PCDHGB2--PCDHGA11 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 188,split_reads2: 97,discordant_mates: 2,coverage1: 1132,coverage2: 11154,confidence: high | ||
| PCDHGB2--PCDHGC3 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 188,split_reads2: 97,discordant_mates: 2,coverage1: 1132,coverage2: 11154,confidence: high | ||
| PCDHGB2--PCDHGB7 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 188,split_reads2: 97,discordant_mates: 2,coverage1: 1132,coverage2: 11154,confidence: high | ||
| PCDHGB2--PCDHGA12 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 188,split_reads2: 97,discordant_mates: 2,coverage1: 1132,coverage2: 11154,confidence: high | ||
| PCDHGB2--PCDHGA9 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 188,split_reads2: 97,discordant_mates: 2,coverage1: 1132,coverage2: 11154,confidence: high | ||
| PCDHGA2--PCDHGA8 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141341395#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 148,split_reads2: 120,discordant_mates: 4,coverage1: 1372,coverage2: 11154,confidence: high | ||
| PCDHGA2--PCDHGB6 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141341395#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 148,split_reads2: 120,discordant_mates: 4,coverage1: 1372,coverage2: 11154,confidence: high | ||
| PCDHGA2--PCDHGA10 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141341395#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 148,split_reads2: 120,discordant_mates: 4,coverage1: 1372,coverage2: 11154,confidence: high | ||
| PCDHGA2--PCDHGC5 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141341395#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 148,split_reads2: 120,discordant_mates: 4,coverage1: 1372,coverage2: 11154,confidence: high | ||
| PCDHGA2--PCDHGC4 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141341395#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 148,split_reads2: 120,discordant_mates: 4,coverage1: 1372,coverage2: 11154,confidence: high | ||
| PCDHGA2--PCDHGA11 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141341395#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 148,split_reads2: 120,discordant_mates: 4,coverage1: 1372,coverage2: 11154,confidence: high | ||
| PCDHGA2--PCDHGC3 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141341395#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 148,split_reads2: 120,discordant_mates: 4,coverage1: 1372,coverage2: 11154,confidence: high | ||
| PCDHGA2--PCDHGB7 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141341395#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 148,split_reads2: 120,discordant_mates: 4,coverage1: 1372,coverage2: 11154,confidence: high | ||
| PCDHGA2--PCDHGA12 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141341395#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 148,split_reads2: 120,discordant_mates: 4,coverage1: 1372,coverage2: 11154,confidence: high | ||
| PCDHGA2--PCDHGA9 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141341395#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 148,split_reads2: 120,discordant_mates: 4,coverage1: 1372,coverage2: 11154,confidence: high | ||
| PCDHGA6--PCDHGA8 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141376507#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 64,split_reads2: 66,discordant_mates: 1,coverage1: 1167,coverage2: 11154,confidence: high | ||
| PCDHGA6--PCDHGB6 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141376507#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 64,split_reads2: 66,discordant_mates: 1,coverage1: 1167,coverage2: 11154,confidence: high | ||
| PCDHGA6--PCDHGA10 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141376507#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 64,split_reads2: 66,discordant_mates: 1,coverage1: 1167,coverage2: 11154,confidence: high | ||
| PCDHGA6--PCDHGC5 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141376507#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 64,split_reads2: 66,discordant_mates: 1,coverage1: 1167,coverage2: 11154,confidence: high | ||
| PCDHGA6--PCDHGC4 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141376507#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 64,split_reads2: 66,discordant_mates: 1,coverage1: 1167,coverage2: 11154,confidence: high | ||
| PCDHGA6--PCDHGA11 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141376507#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 64,split_reads2: 66,discordant_mates: 1,coverage1: 1167,coverage2: 11154,confidence: high | ||
| PCDHGA6--PCDHGC3 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141376507#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 64,split_reads2: 66,discordant_mates: 1,coverage1: 1167,coverage2: 11154,confidence: high | ||
| PCDHGA6--PCDHGB7 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141376507#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 64,split_reads2: 66,discordant_mates: 1,coverage1: 1167,coverage2: 11154,confidence: high | ||
| PCDHGA6--PCDHGA12 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141376507#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 64,split_reads2: 66,discordant_mates: 1,coverage1: 1167,coverage2: 11154,confidence: high | ||
| PCDHGA6--PCDHGA9 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141376507#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 64,split_reads2: 66,discordant_mates: 1,coverage1: 1167,coverage2: 11154,confidence: high | ||
| PCDHGB3--PCDHGA8 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141372809#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 78,split_reads2: 45,discordant_mates: 0,coverage1: 798,coverage2: 11154,confidence: high | ||
| PCDHGB3--PCDHGB6 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141372809#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 78,split_reads2: 45,discordant_mates: 0,coverage1: 798,coverage2: 11154,confidence: high | ||
| PCDHGB3--PCDHGA10 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141372809#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 78,split_reads2: 45,discordant_mates: 0,coverage1: 798,coverage2: 11154,confidence: high | ||
| PCDHGB3--PCDHGC5 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141372809#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 78,split_reads2: 45,discordant_mates: 0,coverage1: 798,coverage2: 11154,confidence: high | ||
| PCDHGB3--PCDHGC4 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141372809#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 78,split_reads2: 45,discordant_mates: 0,coverage1: 798,coverage2: 11154,confidence: high | ||
| PCDHGB3--PCDHGA11 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141372809#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 78,split_reads2: 45,discordant_mates: 0,coverage1: 798,coverage2: 11154,confidence: high | ||
| PCDHGB3--PCDHGC3 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141372809#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 78,split_reads2: 45,discordant_mates: 0,coverage1: 798,coverage2: 11154,confidence: high | ||
| PCDHGB3--PCDHGB7 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141372809#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 78,split_reads2: 45,discordant_mates: 0,coverage1: 798,coverage2: 11154,confidence: high | ||
| PCDHGB3--PCDHGA12 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141372809#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 78,split_reads2: 45,discordant_mates: 0,coverage1: 798,coverage2: 11154,confidence: high | ||
| PCDHGB3--PCDHGA9 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141372809#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 78,split_reads2: 45,discordant_mates: 0,coverage1: 798,coverage2: 11154,confidence: high | ||
| TVP23C--CDRT4 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr17:15503098#chr17:15440285,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 56,split_reads2: 53,discordant_mates: 0,coverage1: 600,coverage2: 358,confidence: high | |
| PCDHA5--PCDHAC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140824127#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 32,split_reads2: 72,discordant_mates: 3,coverage1: 475,coverage2: 1483,confidence: high | ||
| PCDHA5--PCDHAC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140824127#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 32,split_reads2: 72,discordant_mates: 3,coverage1: 475,coverage2: 1483,confidence: high | ||
| PCDHA5--PCDHA13 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140824127#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 32,split_reads2: 72,discordant_mates: 3,coverage1: 475,coverage2: 1483,confidence: high | ||
| PCDHGA5--PCDHGA8 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141366751#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 52,split_reads2: 45,discordant_mates: 1,coverage1: 930,coverage2: 11154,confidence: high | ||
| PCDHGA5--PCDHGB6 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141366751#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 52,split_reads2: 45,discordant_mates: 1,coverage1: 930,coverage2: 11154,confidence: high | ||
| PCDHGA5--PCDHGA10 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141366751#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 52,split_reads2: 45,discordant_mates: 1,coverage1: 930,coverage2: 11154,confidence: high | ||
| PCDHGA5--PCDHGC5 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141366751#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 52,split_reads2: 45,discordant_mates: 1,coverage1: 930,coverage2: 11154,confidence: high | ||
| PCDHGA5--PCDHGC4 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141366751#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 52,split_reads2: 45,discordant_mates: 1,coverage1: 930,coverage2: 11154,confidence: high | ||
| PCDHGA5--PCDHGA11 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141366751#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 52,split_reads2: 45,discordant_mates: 1,coverage1: 930,coverage2: 11154,confidence: high | ||
| PCDHGA5--PCDHGC3 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141366751#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 52,split_reads2: 45,discordant_mates: 1,coverage1: 930,coverage2: 11154,confidence: high | ||
| PCDHGA5--PCDHGB7 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141366751#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 52,split_reads2: 45,discordant_mates: 1,coverage1: 930,coverage2: 11154,confidence: high | ||
| PCDHGA5--PCDHGA12 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141366751#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 52,split_reads2: 45,discordant_mates: 1,coverage1: 930,coverage2: 11154,confidence: high | ||
| PCDHGA5--PCDHGA9 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141366751#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 52,split_reads2: 45,discordant_mates: 1,coverage1: 930,coverage2: 11154,confidence: high | ||
| PCDHGA4--PCDHGA8 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141357621#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 57,split_reads2: 31,discordant_mates: 0,coverage1: 568,coverage2: 11154,confidence: high | ||
| PCDHGA4--PCDHGB6 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141357621#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 57,split_reads2: 31,discordant_mates: 0,coverage1: 568,coverage2: 11154,confidence: high | ||
| PCDHGA4--PCDHGA10 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141357621#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 57,split_reads2: 31,discordant_mates: 0,coverage1: 568,coverage2: 11154,confidence: high | ||
| PCDHGA4--PCDHGC5 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141357621#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 57,split_reads2: 31,discordant_mates: 0,coverage1: 568,coverage2: 11154,confidence: high | ||
| PCDHGA4--PCDHGC4 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141357621#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 57,split_reads2: 31,discordant_mates: 0,coverage1: 568,coverage2: 11154,confidence: high | ||
| PCDHGA4--PCDHGA11 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141357621#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 57,split_reads2: 31,discordant_mates: 0,coverage1: 568,coverage2: 11154,confidence: high | ||
| PCDHGA4--PCDHGC3 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141357621#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 57,split_reads2: 31,discordant_mates: 0,coverage1: 568,coverage2: 11154,confidence: high | ||
| PCDHGA4--PCDHGB7 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141357621#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 57,split_reads2: 31,discordant_mates: 0,coverage1: 568,coverage2: 11154,confidence: high | ||
| PCDHGA4--PCDHGA12 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141357621#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 57,split_reads2: 31,discordant_mates: 0,coverage1: 568,coverage2: 11154,confidence: high | ||
| PCDHGA4--PCDHGA9 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141357621#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 57,split_reads2: 31,discordant_mates: 0,coverage1: 568,coverage2: 11154,confidence: high | ||
| AC015911.9--SLFN12L | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:35522279#chr17:35478185,reading-frame: .,type: deletion/read-through,split_reads1: 50,split_reads2: 14,discordant_mates: 4,coverage1: 738,coverage2: 599,confidence: high | ||
| TANC2--LINC00511 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:63238077#chr17:72336665,reading-frame: out-of-frame,type: deletion/5'-5',split_reads1: 36,split_reads2: 8,discordant_mates: 0,coverage1: 2148,coverage2: 11,confidence: high | ||
| KLRC4--KLRK1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr12:10407636#chr12:10388875,reading-frame: stop-codon,type: deletion/read-through,split_reads1: 27,split_reads2: 14,discordant_mates: 0,coverage1: 220,coverage2: 599,confidence: high | ||
| CCDC169--SOHLH2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr13:36248606#chr13:36202093,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 16,split_reads2: 23,discordant_mates: 0,coverage1: 114,coverage2: 77,confidence: high | ||
| AC092807.3--DDAH1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:85496166#chr1:85358847,reading-frame: .,type: deletion/read-through,split_reads1: 10,split_reads2: 18,discordant_mates: 0,coverage1: 37,coverage2: 505,confidence: high | ||
| CRYZL2P--SEC16B | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:178026155#chr1:177968039,reading-frame: .,type: deletion/read-through,split_reads1: 2,split_reads2: 17,discordant_mates: 0,coverage1: 30,coverage2: 197,confidence: high | ||
| CARD14--LINC01483 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:80198591#chr17:69726985,reading-frame: out-of-frame,type: inversion/3'-3',split_reads1: 11,split_reads2: 6,discordant_mates: 0,coverage1: 779,coverage2: 8,confidence: high |
92 rows