File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2d/fe97e0fd1eee7bce5d60b339a99377/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:25:32
                             Started mapping on |	Jun 08 10:31:57
                                    Finished on |	Jun 08 11:25:21
       Mapping speed, Million of reads per hour |	333.24

                          Number of input reads |	296584450
                      Average input read length |	248
                                    UNIQUE READS:
                   Uniquely mapped reads number |	287325932
                        Uniquely mapped reads % |	96.88%
                          Average mapped length |	247.92
                       Number of splices: Total |	328457548
            Number of splices: Annotated (sjdb) |	324042289
                       Number of splices: GT/AG |	324749767
                       Number of splices: GC/AG |	2049953
                       Number of splices: AT/AC |	219944
               Number of splices: Non-canonical |	1437884
                      Mismatch rate per base, % |	0.20%
                         Deletion rate per base |	0.02%
                        Deletion average length |	2.19
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.60
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	6643523
             % of reads mapped to multiple loci |	2.24%
        Number of reads mapped to too many loci |	229790
             % of reads mapped to too many loci |	0.08%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2128107
                 % of reads unmapped: too short |	0.72%
                Number of reads unmapped: other |	257098
                     % of reads unmapped: other |	0.09%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%