.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (FFPE_HD789_01_RNA_13_A23YTGFLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/e5207e68a9b824fb38d897752e64a2/.command.log
Size: 716 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (FFPE_HD789_01_RNA_13_A23YTGFLT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/e5207e68a9b824fb38d897752e64a2/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/ed167b63bb67bdf6ac399ab10595bc/FFPE_HD789_01_RNA_13_A23YTGFLT4_1.md.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/e5207e68a9b824fb38d897752e64a2/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/ed167b63bb67bdf6ac399ab10595bc/FFPE_HD789_01_RNA_13_A23YTGFLT4_1.md.bai
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 FFPE_HD789_01_RNA_13_A23YTGFLT4_1.md.bam
[W::hts_idx_load3] The index file is older than the data file: FFPE_HD789_01_RNA_13_A23YTGFLT4_1.md.bai