File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/16ebf0d47f60e7e655d8c0f9b2b1f7/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:04:26
                             Started mapping on |	Jun 08 10:10:51
                                    Finished on |	Jun 08 11:04:43
       Mapping speed, Million of reads per hour |	329.77

                          Number of input reads |	296063924
                      Average input read length |	251
                                    UNIQUE READS:
                   Uniquely mapped reads number |	285533325
                        Uniquely mapped reads % |	96.44%
                          Average mapped length |	250.70
                       Number of splices: Total |	315895091
            Number of splices: Annotated (sjdb) |	311542695
                       Number of splices: GT/AG |	312427382
                       Number of splices: GC/AG |	2101769
                       Number of splices: AT/AC |	237227
               Number of splices: Non-canonical |	1128713
                      Mismatch rate per base, % |	0.24%
                         Deletion rate per base |	0.02%
                        Deletion average length |	2.01
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.68
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	7570309
             % of reads mapped to multiple loci |	2.56%
        Number of reads mapped to too many loci |	433429
             % of reads mapped to too many loci |	0.15%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2254349
                 % of reads unmapped: too short |	0.76%
                Number of reads unmapped: other |	272512
                     % of reads unmapped: other |	0.09%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%