File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/13/1bb8b292819d5e05bd940c771d6c08/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:18:57
                             Started mapping on |	Jun 08 10:25:34
                                    Finished on |	Jun 08 11:31:10
       Mapping speed, Million of reads per hour |	271.36

                          Number of input reads |	296687971
                      Average input read length |	266
                                    UNIQUE READS:
                   Uniquely mapped reads number |	283454564
                        Uniquely mapped reads % |	95.54%
                          Average mapped length |	266.00
                       Number of splices: Total |	328220033
            Number of splices: Annotated (sjdb) |	323788185
                       Number of splices: GT/AG |	324526899
                       Number of splices: GC/AG |	2408076
                       Number of splices: AT/AC |	284793
               Number of splices: Non-canonical |	1000265
                      Mismatch rate per base, % |	0.20%
                         Deletion rate per base |	0.01%
                        Deletion average length |	1.92
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.84
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	10523211
             % of reads mapped to multiple loci |	3.55%
        Number of reads mapped to too many loci |	317603
             % of reads mapped to too many loci |	0.11%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2048655
                 % of reads unmapped: too short |	0.69%
                Number of reads unmapped: other |	343938
                     % of reads unmapped: other |	0.12%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%