Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/3c8d62dc6d65d71fe07b3391a2e13d/ref_annot.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/6b2026d731212a9a73c8f78a6e7635/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/6b2026d731212a9a73c8f78a6e7635/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8f/bb1c85fc3ae0922f7eb2c5e371d528/aih-tih-sc-31d31f-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/7483da4a5f2724fe87c13885615525/aih-tih-sc-31d31f-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam
==> STAGING COMPLETE (5 inputs)

null device 
          1 
null device 
          1 
total = 138841252
[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-31d31f-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	138841252
Known Splicing Events:	137157335
Partial Novel Splicing Events:	927476
Novel Splicing Events:	696710
Filtered Splicing Events:	59731

Total splicing  Junctions:	285852
Known Splicing Junctions:	207465
Partial Novel Splicing Junctions:	50424
Novel Splicing Junctions:	27963

===================================================================
Create BED file ...
Create Interact file ...