AIH curated blacklist: matched 15 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 1101
Pass (FILTER=PASS): 40 (3.6%)
Fail (FILTER=FAIL): 1061 (96.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 15
All 15 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 430
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 89
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 79
confidence_below_min(medium<high): 71
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 66
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 52
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 47
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 46
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 46
confidence_below_min(low<high): 33
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 18
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 18
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 16
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 10
Breakdown by confidence:
high: 40 pass, 6 fail (total: 46)
low: 0 pass, 668 fail (total: 668)
medium: 0 pass, 387 fail (total: 387)
Arriba filter: 1101 rows -> 40 PASS; wrote aih-tih-sc-64fc89-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-64fc89-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-64fc89-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt