File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c8/38114a04234a664b1fab0f6d6aa811/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 09:13:23
                             Started mapping on |	Jun 08 09:19:46
                                    Finished on |	Jun 08 09:56:10
       Mapping speed, Million of reads per hour |	356.77

                          Number of input reads |	216439276
                      Average input read length |	234
                                    UNIQUE READS:
                   Uniquely mapped reads number |	206342082
                        Uniquely mapped reads % |	95.33%
                          Average mapped length |	233.62
                       Number of splices: Total |	176695553
            Number of splices: Annotated (sjdb) |	172978057
                       Number of splices: GT/AG |	174256750
                       Number of splices: GC/AG |	1320627
                       Number of splices: AT/AC |	117285
               Number of splices: Non-canonical |	1000891
                      Mismatch rate per base, % |	0.25%
                         Deletion rate per base |	0.03%
                        Deletion average length |	2.16
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.86
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	7250964
             % of reads mapped to multiple loci |	3.35%
        Number of reads mapped to too many loci |	488648
             % of reads mapped to too many loci |	0.23%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	1614760
                 % of reads unmapped: too short |	0.75%
                Number of reads unmapped: other |	742822
                     % of reads unmapped: other |	0.34%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%