File Info
- Filename
- aih-tih-sc-eecf9f-R1_A23YTGFLT4_1.fusions.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/39132896c4480ea86bd4eea93c3239/aih-tih-sc-eecf9f-R1_A23YTGFLT4_1.fusions.csv
- Size
- 3.4 KB
- Task
- NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (aih-tih-sc-eecf9f-R1_A23YTGFLT4_1)
- Attempt
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| PRSS27--TPSB2 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr16:2713529:-#chr16:1228814:-,junction_reads: 107,spanning_reads: 0,ffmp: 0.2602 | |
| PCDHA11--PCDHAC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140871494#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 50,split_reads2: 23,discordant_mates: 0,coverage1: 623,coverage2: 1520,confidence: high | ||
| PCDHA11--PCDHAC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140871494#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 50,split_reads2: 23,discordant_mates: 0,coverage1: 623,coverage2: 1520,confidence: high | ||
| PCDHA11--PCDHA13 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140871494#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 50,split_reads2: 23,discordant_mates: 0,coverage1: 623,coverage2: 1520,confidence: high | ||
| PCDHA10--PCDHAC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 17,split_reads2: 27,discordant_mates: 0,coverage1: 340,coverage2: 1520,confidence: high | ||
| PCDHA10--PCDHAC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 17,split_reads2: 27,discordant_mates: 0,coverage1: 340,coverage2: 1520,confidence: high | ||
| PCDHA10--PCDHA13 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 17,split_reads2: 27,discordant_mates: 0,coverage1: 340,coverage2: 1520,confidence: high | ||
| PCDHA4--PCDHAC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140809572#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 15,split_reads2: 17,discordant_mates: 1,coverage1: 335,coverage2: 1520,confidence: high | ||
| PCDHA4--PCDHAC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140809572#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 15,split_reads2: 17,discordant_mates: 1,coverage1: 335,coverage2: 1520,confidence: high | ||
| PCDHA4--PCDHA13 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140809572#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 15,split_reads2: 17,discordant_mates: 1,coverage1: 335,coverage2: 1520,confidence: high | ||
| TRAPPC9--KCNK9 | Mitelman,FusionGDB2 | 0.312 | 0.5 * (0.125) + 0.5 * (0.500 + 0.000) | position: chr8:139885879#chr8:139631913,reading-frame: out-of-frame,type: inversion/5'-5',split_reads1: 20,split_reads2: 4,discordant_mates: 0,coverage1: 2066,coverage2: 6,confidence: high | |
| TVP23C--CDRT4 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr17:15503098#chr17:15440285,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 18,split_reads2: 5,discordant_mates: 0,coverage1: 424,coverage2: 72,confidence: high | |
| CGNL1--NDUFB10P1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr15:57461892#chr15:57357232,reading-frame: out-of-frame,type: duplication,split_reads1: 9,split_reads2: 1,discordant_mates: 0,coverage1: 1559,coverage2: 4,confidence: high | ||
| CGNL1--CGNL1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr15:57461892#chr15:57357232,reading-frame: out-of-frame,type: duplication,split_reads1: 9,split_reads2: 1,discordant_mates: 0,coverage1: 1559,coverage2: 4,confidence: high |
15 rows