[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-3abdf4-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	206057122
Known Splicing Events:	203974470
Partial Novel Splicing Events:	1448287
Novel Splicing Events:	560765
Filtered Splicing Events:	73600

Total splicing  Junctions:	421161
Known Splicing Junctions:	253804
Partial Novel Splicing Junctions:	111207
Novel Splicing Junctions:	56150

===================================================================
Create BED file ...
Create Interact file ...