File Info

Filename
.command.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ca/d35a98df9168b7a772f949eae73836/.command.out
Size
1.2 KB
Attempt
  AIH curated blacklist: matched 0 fusion rows (breakpoint_ID in qualified set)

================================================================================
ARRIBA FILTERING SUMMARY
================================================================================

Total fusions: 16
  Pass (FILTER=PASS): 1 (6.2%)
  Fail (FILTER=FAIL): 15 (93.8%)

Failure reasons (top 15):
  confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 4
  confidence_below_min(low<high): 3
  total_reads_below_min(2.0<8.0): 2
  confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 2
  confidence_below_min(medium<high): 1
  confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 1
  confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 1
  confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 1

Breakdown by confidence:
  high: 1 pass, 2 fail (total: 3)
  low: 0 pass, 7 fail (total: 7)
  medium: 0 pass, 6 fail (total: 6)
Arriba filter: 16 rows -> 1 PASS; wrote aih-tih-sc-0754d2-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-0754d2-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-0754d2-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt