AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 275
Pass (FILTER=PASS): 19 (6.9%)
Fail (FILTER=FAIL): 256 (93.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 53
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 41
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 40
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 17
confidence_below_min(low<high): 16
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
Breakdown by confidence:
high: 19 pass, 4 fail (total: 23)
low: 0 pass, 112 fail (total: 112)
medium: 0 pass, 140 fail (total: 140)
Arriba filter: 275 rows -> 19 PASS; wrote aih-tih-sc-9e2647-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-9e2647-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-9e2647-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt