nfcore/rnafusion summary report

Databases: COSMIC Mitelman FusionGDB2

Score: 0.625 (explain)

Explained score: 0.5 * (0.125 + 0.125) + 0.5 * (0.500 + 0.500 + 0.000)

position: chr1:156130773:+#chr1:156874906:+
junction_reads: 314
spanning_reads: 2
ffmp: 1.1029

position: chr1:156130773#chr1:156874906
reading-frame: in-frame
type: deletion
split_reads1: 158
split_reads2: 147
discordant_mates: 2
coverage1: 16970
coverage2: 6426
confidence: high

{'starfusion': {'position': 'chr1:156130773:+#chr1:156874906:+', 'junction_reads': 314, 'spanning_reads': 2, 'ffmp': 1.1029}, 'arriba': {'position': 'chr1:156130773#chr1:156874906', 'reading-frame': 'in-frame', 'type': 'deletion', 'split_reads1': '158', 'split_reads2': '147', 'discordant_mates': '2', 'coverage1': '16970', 'coverage2': '6426', 'confidence': 'high'}}

LMNA--NTRK1