Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3e/28ba1ca772b38e1df04ce676b5c7e0/aih-tih-sc-184b05-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/32a9976ff537fd7b26d4243167cfc3/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/32a9976ff537fd7b26d4243167cfc3/.command.run
==> STAGING COMPLETE (3 inputs)

PAIRED_END_BAM_INPUT
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Processed 590000000 records
paired = 293294223
unpaired = 4314326
MERGED PAIRED END READS = 293294223
MATES PROCESSED = 590902772
TOTAL READS     = 297608549
DISTINCT READS  = 1.31397e+08
DISTINCT COUNTS = 730
MAX COUNT       = 757564
COUNTS OF 1     = 6.57047e+07
MAX TERMS       = 100
OBSERVED COUNTS (757565)
1	65704723
2	31124444
3	15413710
4	7862571
5	4181464
6	2341381
7	1388315
8	869580
9	572794
10	396605
11	284655
12	210855
13	161451
14	125535
15	100751
16	81671
17	66662
18	56022
19	46829
20	39902
21	34449
22	29992
23	25863
24	23001
25	20065
26	17784
27	15813
28	14092
29	12694
30	11598
31	10381
32	9340
33	8439
34	7703
35	7224
36	6463
37	6083
38	5735
39	5146
40	4772
41	4457
42	4224
43	3824
44	3601
45	3329
46	3112
47	3020
48	2752
49	2620
50	2515
51	2286
52	2144
53	2019
54	1939
55	1796
56	1689
57	1636
58	1559
59	1546
60	1374
61	1384
62	1262
63	1212
64	1129
65	1080
66	1089
67	987
68	992
69	921
70	883
71	883
72	793
73	739
74	744
75	716
76	646
77	645
78	603
79	557
80	581
81	590
82	590
83	514
84	510
85	465
86	427
87	401
88	445
89	392
90	394
91	399
92	387
93	382
94	311
95	346
96	314
97	274
98	324
99	307
100	281
101	298
102	280
103	236
104	263
105	225
106	222
107	240
108	239
109	214
110	200
111	205
112	162
113	178
114	188
115	173
116	181
117	185
118	162
119	168
120	141
121	163
122	156
123	147
124	155
125	132
126	133
127	127
128	132
129	102
130	134
131	112
132	123
133	104
134	99
135	125
136	94
137	120
138	99
139	109
140	98
141	107
142	77
143	90
144	76
145	89
146	77
147	74
148	94
149	75
150	94
151	82
152	67
153	68
154	78
155	65
156	55
157	62
158	69
159	70
160	65
161	58
162	62
163	70
164	73
165	59
166	55
167	65
168	49
169	45
170	43
171	53
172	61
173	48
174	61
175	60
176	38
177	44
178	42
179	47
180	31
181	35
182	49
183	42
184	41
185	39
186	44
187	29
188	34
189	31
190	32
191	36
192	39
193	28
194	39
195	32
196	26
197	36
198	34
199	32
200	27
201	39
202	38
203	31
204	32
205	29
206	29
207	28
208	32
209	35
210	20
211	25
212	31
213	30
214	23
215	25
216	20
217	28
218	25
219	22
220	23
221	31
222	24
223	27
224	13
225	26
226	15
227	15
228	20
229	24
230	30
231	23
232	21
233	13
234	19
235	20
236	26
237	13
238	25
239	23
240	16
241	19
242	15
243	17
244	13
245	20
246	15
247	14
248	9
249	21
250	21
251	15
252	19
253	17
254	7
255	13
256	10
257	12
258	11
259	14
260	9
261	7
262	10
263	14
264	15
265	16
266	17
267	8
268	14
269	8
270	13
271	15
272	14
273	9
274	11
275	14
276	8
277	7
278	13
279	12
280	12
281	12
282	7
283	8
284	9
285	16
286	5
287	9
288	4
289	5
290	8
291	9
292	11
293	6
294	8
295	5
296	10
297	11
298	12
299	9
300	10
301	11
302	8
303	6
304	7
305	3
306	8
308	14
309	4
310	3
311	6
312	7
313	7
314	5
315	12
316	9
317	3
318	12
319	8
320	12
321	7
322	5
323	6
324	8
325	9
326	8
327	10
328	7
329	5
330	6
331	6
332	10
333	3
334	5
335	6
336	6
337	8
338	2
339	5
340	9
341	3
342	4
343	8
344	8
345	4
346	2
347	8
348	5
349	7
350	10
351	3
352	5
353	3
354	2
355	6
356	5
357	9
358	4
359	1
360	3
361	6
362	4
363	6
364	2
365	8
366	1
367	2
368	3
369	4
370	5
371	2
372	1
373	7
374	5
375	9
376	3
377	2
378	4
379	5
380	5
381	7
383	3
384	1
385	2
386	3
387	4
388	6
389	1
390	2
391	8
392	1
393	4
394	4
395	2
396	5
397	3
398	1
399	3
400	5
401	5
402	3
403	2
404	7
405	8
406	4
407	3
408	3
409	2
410	2
411	1
412	2
413	4
414	1
415	3
416	2
417	2
418	3
419	2
420	1
421	2
422	5
423	1
424	2
425	3
427	3
428	2
429	7
430	2
431	1
432	4
434	2
435	5
436	2
438	1
439	4
440	2
441	2
442	1
443	1
446	3
448	3
449	1
451	2
452	1
453	3
454	3
456	2
458	3
460	1
461	1
463	1
464	3
466	3
467	5
468	1
469	3
470	2
471	1
472	3
474	1
475	1
476	3
477	2
478	1
480	5
481	1
482	2
483	3
484	2
485	2
486	1
489	2
490	2
491	1
492	2
493	1
494	4
495	2
496	3
497	1
499	2
500	1
501	2
502	2
503	2
504	2
505	1
506	3
507	5
508	1
509	3
510	1
512	4
513	1
514	1
515	1
518	1
524	1
525	2
526	1
528	1
529	1
531	2
532	1
533	1
535	3
536	3
540	1
541	2
544	2
546	2
547	2
548	2
549	1
550	1
551	2
553	2
554	2
558	2
559	2
560	1
562	3
563	2
564	1
567	1
568	1
570	1
571	1
572	1
573	1
574	1
576	1
579	2
580	1
583	1
590	1
592	2
596	1
597	1
599	1
600	2
604	2
605	3
606	2
609	2
610	1
612	1
613	1
614	2
616	2
621	2
622	2
624	1
630	1
631	1
633	1
634	2
635	4
637	1
640	1
645	1
647	3
649	3
651	2
654	1
655	3
658	2
663	2
664	1
666	2
667	1
669	2
673	1
676	1
680	1
681	1
683	1
684	1
687	2
688	1
690	1
692	1
694	1
697	1
698	2
699	3
703	2
706	1
707	1
708	1
709	1
714	1
717	1
718	1
719	2
720	1
721	3
722	1
724	1
728	1
730	1
731	1
732	1
733	1
734	1
735	3
737	1
739	1
740	2
748	1
750	1
752	1
753	1
757	2
761	1
769	1
780	1
798	1
805	1
806	1
811	1
812	1
816	1
820	1
822	1
825	1
827	1
828	1
831	1
837	1
840	1
852	1
857	1
860	1
862	1
863	1
873	1
874	1
877	1
879	1
881	1
885	1
890	1
892	2
893	1
904	1
906	1
907	1
911	1
920	1
924	1
925	1
926	2
932	1
942	1
958	1
964	1
967	1
969	1
985	1
986	1
988	1
994	1
996	1
997	1
1000	1
1027	1
1035	1
1040	1
1048	1
1052	1
1070	1
1073	1
1079	1
1100	1
1101	1
1107	2
1109	1
1112	1
1117	2
1129	1
1133	1
1136	1
1142	1
1150	1
1163	1
1180	1
1198	1
1212	1
1213	1
1244	1
1283	1
1300	1
1305	1
1322	1
1331	1
1367	1
1375	1
1387	1
1420	1
1440	1
1445	1
1449	1
1559	1
1607	1
1655	1
1673	1
1700	1
1702	1
1716	1
1731	1
1797	1
1824	1
1863	1
1867	1
1920	1
1956	1
1979	1
2007	1
2025	1
2118	1
2216	1
2358	1
2701	1
3298	1
3597	1
5955	1
12403	1
12560	1
41971	1
757564	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
._.................._.._....._................_._..._..............._.._
..._.....__.._...._._........._......._.._....
[COMPUTING CONFIDENCE INTERVALS]
[WRITING OUTPUT]