AIH curated blacklist: matched 12 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 362
Pass (FILTER=PASS): 43 (11.9%)
Fail (FILTER=FAIL): 319 (88.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 12
All 12 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 94
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 50
confidence_below_min(low<high): 28
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 27
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 23
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 7
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 4
Breakdown by confidence:
high: 43 pass, 3 fail (total: 46)
low: 0 pass, 128 fail (total: 128)
medium: 0 pass, 188 fail (total: 188)
Arriba filter: 362 rows -> 43 PASS; wrote aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt