NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (aih-tih-sc-538ae3-R1_A23YTGFLT4_1) - dev_rna_exp0021-73d51683 - Workflow Tracker

Runs
dev_rna_exp0021-73d51683
Tasks
GATK4_MARKDUPLICATES (aih-tih-sc-538ae3-R1_A23YTGFLT4_1)

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Task Info

Status: succeeded
Hash: efd41f1f46fb
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: aih-tih-sc-538ae3-R1_A23YTGFLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 59/fcd5df
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/59/fcd5dfd06b74cd6610b3871a5e1d37
Native ID: nf-59fcd5dfd06b74cd6610b3871a5e1d37-07f34

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 96.4 GB / 148.0 GB
Process I/O (rchar / wchar): 56.3 GB / 36.4 GB
Disk I/O (read / write): - / 36.4 GB
Host: i-09a06d2b72b73ff12 ( on-demand)

Runtime

Submitted: Jun 08, 2026 2:36:34 AM
Completed: Jun 08, 2026 3:27:27 AM
Total Duration: 50m 52s

Phases

Queue: 36s
Execution: 47m 57s
Stage/Unstage: 2m 19s

Attempt 1

Execution

Status: failed
Hash: 30/efe698
Failure Reason: BackoffLimitExceeded ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/30/efe698194414bea452b047964af7c3
Native ID: nf-30efe698194414bea452b047964af7c3-e0ebc

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 74.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-08225c8148dd33143 ( spot)

Runtime

Submitted: Jun 08, 2026 1:47:32 AM
Completed: Jun 08, 2026 2:36:33 AM
Total Duration: 49m 1s

Phases

Queue: 49m 1s
Execution: -
Stage/Unstage: -