Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8c/c3ba7830cd10c6c64d2669bd991887/aih-tih-sc-f27606-R1_A23YTGFLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/cf30d1a7c6ddf4438a1c54a442f793/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8c/c3ba7830cd10c6c64d2669bd991887/aih-tih-sc-f27606-R1_A23YTGFLT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/cf30d1a7c6ddf4438a1c54a442f793/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/58/1efc52d67a117d531acba406cd9969/aih-tih-sc-f27606-R1_A23YTGFLT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.uAig78QKs0/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.uAig78QKs0/./star-fusion.preliminary
-sample contains 291477016 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir  -J /tmp/nxf.uAig78QKs0/aih-tih-sc-f27606-R1_A23YTGFLT4_1.Chimeric.out.junction  -O /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.uAig78QKs0/aih-tih-sc-f27606-R1_A23YTGFLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[3090000], rate=64375.00/min -building interval tree based on /tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[3030000], rate=50683.02/min 
[3040000], rate=50779.51/min 
[3050000], rate=50889.88/min 
[3060000], rate=50971.68/min -building interval tree based on /tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=60000.00/min 
[20000], rate=57142.86/min 
[30000], rate=58064.52/min 
[40000], rate=60000.00/min 
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[2120000], rate=41325.54/min 
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[2220000], rate=42406.88/min 
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[2480000], rate=44604.32/min 
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[2550000], rate=44117.65/min 
[2560000], rate=44024.08/min 
[2570000], rate=43969.20/min 
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[2600000], rate=43795.62/min 
[2610000], rate=43767.47/min 
[2620000], rate=43715.24/min 
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[2650000], rate=43813.72/min 
[2660000], rate=43810.05/min 
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[2680000], rate=43814.71/min 
[2690000], rate=43811.07/min 
[2700000], rate=43819.31/min 
[2710000], rate=43827.49/min 
-building interval tree based on /tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=40000.00/min 
[20000], rate=50000.00/min 
[30000], rate=66666.67/min 
[40000], rate=75000.00/min 
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[2000000], rate=38240.92/min 
[2010000], rate=38297.87/min 
[2020000], rate=38354.43/min 
[2030000], rate=38434.84/min 
[2040000], rate=38539.04/min 
[2050000], rate=38618.52/min 
[2060000], rate=38721.80/min 
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[3050000], rate=43252.19/min 
[3060000], rate=43301.89/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
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 6303030.30 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.uAig78QKs0/aih-tih-sc-f27606-R1_A23YTGFLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -381060.643404
EM: Round [1] log likelihood: -380672.589957
EM: Round [2] log likelihood: -380530.799097
EM: Round [3] log likelihood: -380462.782986
EM: Round [4] log likelihood: -380426.117302
EM: Round [5] log likelihood: -380405.208129
EM: Round [6] log likelihood: -380392.778745
EM: Round [7] log likelihood: -380385.071931
EM: Round [8] log likelihood: -380380.077726
EM: Round [9] log likelihood: -380376.697316
EM: Round [10] log likelihood: -380374.314716
EM: Round [11] log likelihood: -380372.573810
EM: Round [12] log likelihood: -380371.261472
EM: Round [13] log likelihood: -380370.245465
EM: Round [14] log likelihood: -380369.440784
EM: Round [15] log likelihood: -380368.790926
EM: Round [16] log likelihood: -380368.257179
EM: Round [17] log likelihood: -380367.812299
EM: Round [18] log likelihood: -380367.436655
EM: Round [19] log likelihood: -380367.115810
EM: Round [20] log likelihood: -380366.838955
EM: Round [21] log likelihood: -380366.597873
EM: Round [22] log likelihood: -380366.386225
EM: Round [23] log likelihood: -380366.199058
EM: Round [24] log likelihood: -380366.032461
EM: Round [25] log likelihood: -380365.883306
EM: Round [26] log likelihood: -380365.749072
EM: Round [27] log likelihood: -380365.627700
EM: Round [28] log likelihood: -380365.517500
EM: Round [29] log likelihood: -380365.417069
EM: Round [30] log likelihood: -380365.325233
EM: Round [31] log likelihood: -380365.241003
EM: Round [32] log likelihood: -380365.163539
EM: Round [33] log likelihood: -380365.092122
EM: Round [34] log likelihood: -380365.026136
EM: Round [35] log likelihood: -380364.965044
EM: Round [36] log likelihood: -380364.908380
EM: Round [37] log likelihood: -380364.855736
EM: Round [38] log likelihood: -380364.806753
EM: Round [39] log likelihood: -380364.761114
EM: Round [40] log likelihood: -380364.718536
EM: Round [41] log likelihood: -380364.678767
EM: Round [42] log likelihood: -380364.641583
EM: Round [43] log likelihood: -380364.606781
EM: Round [44] log likelihood: -380364.574179
EM: Round [45] log likelihood: -380364.543613
EM: Round [46] log likelihood: -380364.514932
EM: Round [47] log likelihood: -380364.488001
EM: Round [48] log likelihood: -380364.462696
EM: Round [49] log likelihood: -380364.438904
EM: Round [50] log likelihood: -380364.416522
EM: Round [51] log likelihood: -380364.395454
EM: Round [52] log likelihood: -380364.375612
EM: Round [53] log likelihood: -380364.356918
EM: Round [54] log likelihood: -380364.339295
EM: Round [55] log likelihood: -380364.322677
EM: Round [56] log likelihood: -380364.306998
EM: Round [57] log likelihood: -380364.292201
EM: Round [58] log likelihood: -380364.278231
EM: Round [59] log likelihood: -380364.265037
EM: Round [60] log likelihood: -380364.252572
EM: Round [61] log likelihood: -380364.240792
EM: Round [62] log likelihood: -380364.229656
EM: Round [63] log likelihood: -380364.219126
EM: Round [64] log likelihood: -380364.209167
EM: Round [65] log likelihood: -380364.199744
EM: Round [66] log likelihood: -380364.190828
EM: Round [67] log likelihood: -380364.182388
EM: Round [68] log likelihood: -380364.174398
EM: Round [69] log likelihood: -380364.166831
EM: Round [70] log likelihood: -380364.159664
EM: Round [71] log likelihood: -380364.152875
EM: Round [72] log likelihood: -380364.146442
EM: Round [73] log likelihood: -380364.140345
EM: Round [74] log likelihood: -380364.134565
EM: Round [75] log likelihood: -380364.129086
EM: Round [76] log likelihood: -380364.123890
EM: Round [77] log likelihood: -380364.118962
EM: Round [78] log likelihood: -380364.114288
EM: Round [79] log likelihood: -380364.109853
EM: Round [80] log likelihood: -380364.105645
EM: Round [81] log likelihood: -380364.101651
EM: Round [82] log likelihood: -380364.097860
EM: Round [83] log likelihood: -380364.094262
EM: Round [84] log likelihood: -380364.090845
EM: Round [85] log likelihood: -380364.087600
EM: Round [86] log likelihood: -380364.084518
EM: Round [87] log likelihood: -380364.081590
EM: Round [88] log likelihood: -380364.078809
EM: Round [89] log likelihood: -380364.076166
EM: Round [90] log likelihood: -380364.073654
EM: Round [91] log likelihood: -380364.071267
EM: Round [92] log likelihood: -380364.068998
EM: Round [93] log likelihood: -380364.066841
EM: Round [94] log likelihood: -380364.064789
EM: Round [95] log likelihood: -380364.062838
EM: Round [96] log likelihood: -380364.060983
EM: Round [97] log likelihood: -380364.059218
EM: Round [98] log likelihood: -380364.057539
EM: Round [99] log likelihood: -380364.055941
EM: Round [100] log likelihood: -380364.054420
EM: Round [101] log likelihood: -380364.052973
EM: Round [102] log likelihood: -380364.051596
EM: Round [103] log likelihood: -380364.050285
EM: Round [104] log likelihood: -380364.049036
EM: Round [105] log likelihood: -380364.047847
EM: Round [106] log likelihood: -380364.046715
EM: Round [107] log likelihood: -380364.045636
EM: Round [108] log likelihood: -380364.044609
EM: Round [109] log likelihood: -380364.043630
EM: Round [110] log likelihood: -380364.042697
EM: Round [111] log likelihood: -380364.041808
EM: Round [112] log likelihood: -380364.040961
EM: Round [113] log likelihood: -380364.040154
EM: Round [114] log likelihood: -380364.039384
EM: Round [115] log likelihood: -380364.038650
EM: Round [116] log likelihood: -380364.037950
EM: Round [117] log likelihood: -380364.037282
EM: Round [118] log likelihood: -380364.036645
EM: Round [119] log likelihood: -380364.036038
EM: Round [120] log likelihood: -380364.035458
EM: Round [121] log likelihood: -380364.034905
EM: Round [122] log likelihood: -380364.034377
EM: Round [123] log likelihood: -380364.033873
EM: Round [124] log likelihood: -380364.033393
EM: Round [125] log likelihood: -380364.032933
EM: Round [126] log likelihood: -380364.032495
EM: Round [127] log likelihood: -380364.032077
EM: Round [128] log likelihood: -380364.031677
EM: Round [129] log likelihood: -380364.031295
EM: Round [130] log likelihood: -380364.030930
EM: Round [131] log likelihood: -380364.030582
EM: Round [132] log likelihood: -380364.030249
EM: Round [133] log likelihood: -380364.029930
EM: Round [134] log likelihood: -380364.029626
EM: Round [135] log likelihood: -380364.029335
EM: Round [136] log likelihood: -380364.029057
EM: Round [137] log likelihood: -380364.028791
EM: Round [138] log likelihood: -380364.028537
EM: Round [139] log likelihood: -380364.028294
EM: Round [140] log likelihood: -380364.028061
EM: Round [141] log likelihood: -380364.027839
EM: Round [142] log likelihood: -380364.027626
EM: Round [143] log likelihood: -380364.027422
EM: Round [144] log likelihood: -380364.027227
EM: Round [145] log likelihood: -380364.027040
EM: Round [146] log likelihood: -380364.026861
EM: Round [147] log likelihood: -380364.026690
EM: Round [148] log likelihood: -380364.026526
EM: Round [149] log likelihood: -380364.026369
EM: Round [150] log likelihood: -380364.026219
EM: Round [151] log likelihood: -380364.026075
EM: Round [152] log likelihood: -380364.025937
EM: Round [153] log likelihood: -380364.025805
EM: Round [154] log likelihood: -380364.025678
EM: Round [155] log likelihood: -380364.025556
EM: Round [156] log likelihood: -380364.025440
EM: Round [157] log likelihood: -380364.025328
EM: Round [158] log likelihood: -380364.025221
EM: Round [159] log likelihood: -380364.025118
EM: Round [160] log likelihood: -380364.025020
EM: Stopping iterations at round 160 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -380663.333205
EM: Round [1] log likelihood: -380324.946548
EM: Round [2] log likelihood: -380209.671212
EM: Round [3] log likelihood: -380157.013777
EM: Round [4] log likelihood: -380129.552197
EM: Round [5] log likelihood: -380114.244393
EM: Round [6] log likelihood: -380105.291882
EM: Round [7] log likelihood: -380099.806704
EM: Round [8] log likelihood: -380096.283033
EM: Round [9] log likelihood: -380093.913037
EM: Round [10] log likelihood: -380092.250257
EM: Round [11] log likelihood: -380091.039360
EM: Round [12] log likelihood: -380090.128768
EM: Round [13] log likelihood: -380089.425001
EM: Round [14] log likelihood: -380088.868241
EM: Round [15] log likelihood: -380088.418877
EM: Round [16] log likelihood: -380088.049860
EM: Round [17] log likelihood: -380087.742207
EM: Round [18] log likelihood: -380087.482281
EM: Round [19] log likelihood: -380087.260083
EM: Round [20] log likelihood: -380087.068147
EM: Round [21] log likelihood: -380086.900809
EM: Round [22] log likelihood: -380086.753711
EM: Round [23] log likelihood: -380086.623456
EM: Round [24] log likelihood: -380086.507362
EM: Round [25] log likelihood: -380086.403290
EM: Round [26] log likelihood: -380086.309514
EM: Round [27] log likelihood: -380086.224628
EM: Round [28] log likelihood: -380086.147474
EM: Round [29] log likelihood: -380086.077094
EM: Round [30] log likelihood: -380086.012682
EM: Round [31] log likelihood: -380085.953562
EM: Round [32] log likelihood: -380085.899155
EM: Round [33] log likelihood: -380085.848967
EM: Round [34] log likelihood: -380085.802574
EM: Round [35] log likelihood: -380085.759604
EM: Round [36] log likelihood: -380085.719736
EM: Round [37] log likelihood: -380085.682686
EM: Round [38] log likelihood: -380085.648206
EM: Round [39] log likelihood: -380085.616073
EM: Round [40] log likelihood: -380085.586092
EM: Round [41] log likelihood: -380085.558087
EM: Round [42] log likelihood: -380085.531899
EM: Round [43] log likelihood: -380085.507388
EM: Round [44] log likelihood: -380085.484426
EM: Round [45] log likelihood: -380085.462896
EM: Round [46] log likelihood: -380085.442694
EM: Round [47] log likelihood: -380085.423724
EM: Round [48] log likelihood: -380085.405899
EM: Round [49] log likelihood: -380085.389138
EM: Round [50] log likelihood: -380085.373370
EM: Round [51] log likelihood: -380085.358527
EM: Round [52] log likelihood: -380085.344547
EM: Round [53] log likelihood: -380085.331374
EM: Round [54] log likelihood: -380085.318955
EM: Round [55] log likelihood: -380085.307241
EM: Round [56] log likelihood: -380085.296188
EM: Round [57] log likelihood: -380085.285755
EM: Round [58] log likelihood: -380085.275902
EM: Round [59] log likelihood: -380085.266594
EM: Round [60] log likelihood: -380085.257799
EM: Round [61] log likelihood: -380085.249484
EM: Round [62] log likelihood: -380085.241621
EM: Round [63] log likelihood: -380085.234183
EM: Round [64] log likelihood: -380085.227146
EM: Round [65] log likelihood: -380085.220485
EM: Round [66] log likelihood: -380085.214178
EM: Round [67] log likelihood: -380085.208206
EM: Round [68] log likelihood: -380085.202549
EM: Round [69] log likelihood: -380085.197190
EM: Round [70] log likelihood: -380085.192110
EM: Round [71] log likelihood: -380085.187295
EM: Round [72] log likelihood: -380085.182730
EM: Round [73] log likelihood: -380085.178400
EM: Round [74] log likelihood: -380085.174293
EM: Round [75] log likelihood: -380085.170397
EM: Round [76] log likelihood: -380085.166699
EM: Round [77] log likelihood: -380085.163189
EM: Round [78] log likelihood: -380085.159857
EM: Round [79] log likelihood: -380085.156693
EM: Round [80] log likelihood: -380085.153689
EM: Round [81] log likelihood: -380085.150835
EM: Round [82] log likelihood: -380085.148123
EM: Round [83] log likelihood: -380085.145546
EM: Round [84] log likelihood: -380085.143098
EM: Round [85] log likelihood: -380085.140770
EM: Round [86] log likelihood: -380085.138557
EM: Round [87] log likelihood: -380085.136452
EM: Round [88] log likelihood: -380085.134451
EM: Round [89] log likelihood: -380085.132547
EM: Round [90] log likelihood: -380085.130735
EM: Round [91] log likelihood: -380085.129012
EM: Round [92] log likelihood: -380085.127372
EM: Round [93] log likelihood: -380085.125811
EM: Round [94] log likelihood: -380085.124324
EM: Round [95] log likelihood: -380085.122909
EM: Round [96] log likelihood: -380085.121562
EM: Round [97] log likelihood: -380085.120278
EM: Round [98] log likelihood: -380085.119056
EM: Round [99] log likelihood: -380085.117891
EM: Round [100] log likelihood: -380085.116781
EM: Round [101] log likelihood: -380085.115724
EM: Round [102] log likelihood: -380085.114715
EM: Round [103] log likelihood: -380085.113754
EM: Round [104] log likelihood: -380085.112838
EM: Round [105] log likelihood: -380085.111965
EM: Round [106] log likelihood: -380085.111131
EM: Round [107] log likelihood: -380085.110337
EM: Round [108] log likelihood: -380085.109579
EM: Round [109] log likelihood: -380085.108855
EM: Round [110] log likelihood: -380085.108165
EM: Round [111] log likelihood: -380085.107506
EM: Round [112] log likelihood: -380085.106878
EM: Round [113] log likelihood: -380085.106277
EM: Round [114] log likelihood: -380085.105704
EM: Round [115] log likelihood: -380085.105157
EM: Round [116] log likelihood: -380085.104635
EM: Round [117] log likelihood: -380085.104135
EM: Round [118] log likelihood: -380085.103659
EM: Round [119] log likelihood: -380085.103203
EM: Round [120] log likelihood: -380085.102768
EM: Round [121] log likelihood: -380085.102352
EM: Round [122] log likelihood: -380085.101954
EM: Round [123] log likelihood: -380085.101574
EM: Round [124] log likelihood: -380085.101210
EM: Round [125] log likelihood: -380085.100863
EM: Round [126] log likelihood: -380085.100530
EM: Round [127] log likelihood: -380085.100213
EM: Round [128] log likelihood: -380085.099908
EM: Round [129] log likelihood: -380085.099618
EM: Round [130] log likelihood: -380085.099339
EM: Round [131] log likelihood: -380085.099073
EM: Round [132] log likelihood: -380085.098818
EM: Round [133] log likelihood: -380085.098574
EM: Round [134] log likelihood: -380085.098340
EM: Round [135] log likelihood: -380085.098116
EM: Round [136] log likelihood: -380085.097902
EM: Round [137] log likelihood: -380085.097697
EM: Round [138] log likelihood: -380085.097500
EM: Round [139] log likelihood: -380085.097312
EM: Round [140] log likelihood: -380085.097131
EM: Round [141] log likelihood: -380085.096959
EM: Round [142] log likelihood: -380085.096793
EM: Round [143] log likelihood: -380085.096634
EM: Round [144] log likelihood: -380085.096482
EM: Round [145] log likelihood: -380085.096336
EM: Round [146] log likelihood: -380085.096196
EM: Round [147] log likelihood: -380085.096061
EM: Round [148] log likelihood: -380085.095932
EM: Round [149] log likelihood: -380085.095809
EM: Round [150] log likelihood: -380085.095690
EM: Round [151] log likelihood: -380085.095576
EM: Round [152] log likelihood: -380085.095467
EM: Round [153] log likelihood: -380085.095362
EM: Round [154] log likelihood: -380085.095261
EM: Round [155] log likelihood: -380085.095165
EM: Stopping iterations at round 155 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 291477016 > /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir > /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir --annotate /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir
-done, see /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1897, filtered: 11877)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.uAig78QKs0/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.uAig78QKs0/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277283.1]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000220685.3]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000243980.3]
WARNING, no entry stored in dbm for [ENSG00000263740.2]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000251676.2]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000276168.1]
WARNING, no entry stored in dbm for [ENSG00000240750.3]
WARNING, no entry stored in dbm for [ENSG00000225159.1]
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WARNING, no entry stored in dbm for [ENSG00000231528.3]
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WARNING, no entry stored in dbm for [ENSG00000270533.2]
WARNING, no entry stored in dbm for [ENSG00000273828.2]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000282885.2]
WARNING, no entry stored in dbm for [ENSG00000240750.3]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000266573.6]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000273819.1]
WARNING, no entry stored in dbm for [ENSG00000283433.1]
WARNING, no entry stored in dbm for [ENSG00000207277.1]
WARNING, no entry stored in dbm for [ENSG00000287168.1]
WARNING, no entry stored in dbm for [ENSG00000226759.8]
WARNING, no entry stored in dbm for [ENSG00000234911.2]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000281641.3]
WARNING, no entry stored in dbm for [ENSG00000235544.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000279036.1]
WARNING, no entry stored in dbm for [ENSG00000259020.3]
WARNING, no entry stored in dbm for [ENSG00000233905.1]
WARNING, no entry stored in dbm for [ENSG00000260804.3]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000131002.12]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000184991.3]
WARNING, no entry stored in dbm for [ENSG00000244055.2]
WARNING, no entry stored in dbm for [ENSG00000284625.1]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000228980.4]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000286116.1]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000197254.4]
WARNING, no entry stored in dbm for [ENSG00000281103.2]
WARNING, no entry stored in dbm for [ENSG00000286004.1]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000255400.1]
WARNING, no entry stored in dbm for [ENSG00000260293.2]
WARNING, no entry stored in dbm for [ENSG00000245213.7]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000231749.3]
WARNING, no entry stored in dbm for [ENSG00000133624.13]
WARNING, no entry stored in dbm for [ENSG00000239893.2]
WARNING, no entry stored in dbm for [ENSG00000277053.4]
WARNING, no entry stored in dbm for [ENSG00000226803.9]
WARNING, no entry stored in dbm for [ENSG00000260228.6]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000224596.8]
WARNING, no entry stored in dbm for [ENSG00000254170.1]
WARNING, no entry stored in dbm for [ENSG00000232618.2]
WARNING, no entry stored in dbm for [ENSG00000235861.1]
WARNING, no entry stored in dbm for [ENSG00000272374.1]
WARNING, no entry stored in dbm for [ENSG00000236829.9]
WARNING, no entry stored in dbm for [ENSG00000287891.1]
WARNING, no entry stored in dbm for [ENSG00000244649.5]
WARNING, no entry stored in dbm for [ENSG00000260721.1]
WARNING, no entry stored in dbm for [ENSG00000267225.1]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000223509.8]
WARNING, no entry stored in dbm for [ENSG00000259882.2]
WARNING, no entry stored in dbm for [ENSG00000178082.6]
WARNING, no entry stored in dbm for [ENSG00000228639.8]
WARNING, no entry stored in dbm for [ENSG00000261174.2]
WARNING, no entry stored in dbm for [ENSG00000287792.1]
WARNING, no entry stored in dbm for [ENSG00000242435.1]
WARNING, no entry stored in dbm for [ENSG00000067601.8]
WARNING, no entry stored in dbm for [ENSG00000228340.6]
WARNING, no entry stored in dbm for [ENSG00000288032.1]
WARNING, no entry stored in dbm for [ENSG00000230061.2]
WARNING, no entry stored in dbm for [ENSG00000100181.22]
WARNING, no entry stored in dbm for [ENSG00000180438.15]
WARNING, no entry stored in dbm for [ENSG00000180438.15]
WARNING, no entry stored in dbm for [ENSG00000214297.3]
WARNING, no entry stored in dbm for [ENSG00000261824.7]
WARNING, no entry stored in dbm for [ENSG00000266256.3]
WARNING, no entry stored in dbm for [ENSG00000260671.2]
WARNING, no entry stored in dbm for [ENSG00000254468.2]
WARNING, no entry stored in dbm for [ENSG00000225066.1]
WARNING, no entry stored in dbm for [ENSG00000206623.1]
WARNING, no entry stored in dbm for [ENSG00000251022.6]
WARNING, no entry stored in dbm for [ENSG00000237139.1]
WARNING, no entry stored in dbm for [ENSG00000270576.1]
WARNING, no entry stored in dbm for [ENSG00000219470.1]
WARNING, no entry stored in dbm for [ENSG00000264538.6]
WARNING, no entry stored in dbm for [ENSG00000229807.12]
WARNING, no entry stored in dbm for [ENSG00000242294.6]
WARNING, no entry stored in dbm for [ENSG00000174353.17]
WARNING, no entry stored in dbm for [ENSG00000271465.1]
WARNING, no entry stored in dbm for [ENSG00000215424.10]
WARNING, no entry stored in dbm for [ENSG00000261183.5]
WARNING, no entry stored in dbm for [ENSG00000244128.7]
WARNING, no entry stored in dbm for [ENSG00000240350.3]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000269893.8]
WARNING, no entry stored in dbm for [ENSG00000269893.8]
WARNING, no entry stored in dbm for [ENSG00000269893.8]
WARNING, no entry stored in dbm for [ENSG00000175061.18]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000258186.2]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000279198.1]
WARNING, no entry stored in dbm for [ENSG00000283828.1]
WARNING, no entry stored in dbm for [ENSG00000213332.4]
WARNING, no entry stored in dbm for [ENSG00000254332.1]
WARNING, no entry stored in dbm for [ENSG00000249882.2]
WARNING, no entry stored in dbm for [ENSG00000213081.3]
WARNING, no entry stored in dbm for [ENSG00000267632.1]
WARNING, no entry stored in dbm for [ENSG00000286818.1]
WARNING, no entry stored in dbm for [ENSG00000219507.4]
WARNING, no entry stored in dbm for [ENSG00000276850.5]
WARNING, no entry stored in dbm for [ENSG00000260588.1]
WARNING, no entry stored in dbm for [ENSG00000203706.8]
WARNING, no entry stored in dbm for [ENSG00000176840.12]
WARNING, no entry stored in dbm for [ENSG00000245958.6]
WARNING, no entry stored in dbm for [ENSG00000247950.7]
WARNING, no entry stored in dbm for [ENSG00000238098.9]
WARNING, no entry stored in dbm for [ENSG00000215837.7]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000248365.3]
WARNING, no entry stored in dbm for [ENSG00000251388.1]
WARNING, no entry stored in dbm for [ENSG00000258692.2]
WARNING, no entry stored in dbm for [ENSG00000286848.1]
WARNING, no entry stored in dbm for [ENSG00000182841.12]
WARNING, no entry stored in dbm for [ENSG00000213326.4]
WARNING, no entry stored in dbm for [ENSG00000283849.1]
WARNING, no entry stored in dbm for [ENSG00000239253.1]
WARNING, no entry stored in dbm for [ENSG00000224892.6]
WARNING, no entry stored in dbm for [ENSG00000271933.1]
WARNING, no entry stored in dbm for [ENSG00000235735.1]
WARNING, no entry stored in dbm for [ENSG00000204650.14]
WARNING, no entry stored in dbm for [ENSG00000232077.2]
WARNING, no entry stored in dbm for [ENSG00000248439.2]
WARNING, no entry stored in dbm for [ENSG00000241081.1]
WARNING, no entry stored in dbm for [ENSG00000225483.1]
WARNING, no entry stored in dbm for [ENSG00000206573.9]
WARNING, no entry stored in dbm for [ENSG00000200296.1]
WARNING, no entry stored in dbm for [ENSG00000230513.2]
WARNING, no entry stored in dbm for [ENSG00000255304.1]
WARNING, no entry stored in dbm for [ENSG00000227371.1]
WARNING, no entry stored in dbm for [ENSG00000280007.1]
WARNING, no entry stored in dbm for [ENSG00000275305.1]
WARNING, no entry stored in dbm for [ENSG00000244006.3]
WARNING, no entry stored in dbm for [ENSG00000276047.1]
WARNING, no entry stored in dbm for [ENSG00000241529.3]
WARNING, no entry stored in dbm for [ENSG00000276047.1]
WARNING, no entry stored in dbm for [ENSG00000239224.3]
WARNING, no entry stored in dbm for [ENSG00000276047.1]
WARNING, no entry stored in dbm for [ENSG00000275878.1]
WARNING, no entry stored in dbm for [ENSG00000276047.1]
WARNING, no entry stored in dbm for [ENSG00000243951.1]
WARNING, no entry stored in dbm for [ENSG00000276047.1]
WARNING, no entry stored in dbm for [ENSG00000275090.1]
WARNING, no entry stored in dbm for [ENSG00000243274.3]
WARNING, no entry stored in dbm for [ENSG00000241227.3]
WARNING, no entry stored in dbm for [ENSG00000234452.5]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000280007.1]
WARNING, no entry stored in dbm for [ENSG00000236741.4]
WARNING, no entry stored in dbm for [ENSG00000254740.2]
WARNING, no entry stored in dbm for [ENSG00000228414.7]
WARNING, no entry stored in dbm for [ENSG00000276997.4]
WARNING, no entry stored in dbm for [ENSG00000273125.2]
WARNING, no entry stored in dbm for [ENSG00000225470.8]
WARNING, no entry stored in dbm for [ENSG00000260884.1]
WARNING, no entry stored in dbm for [ENSG00000225869.4]
WARNING, no entry stored in dbm for [ENSG00000242479.1]
WARNING, no entry stored in dbm for [ENSG00000286427.1]
WARNING, no entry stored in dbm for [ENSG00000244564.2]
WARNING, no entry stored in dbm for [ENSG00000250842.1]
WARNING, no entry stored in dbm for [ENSG00000287320.1]
WARNING, no entry stored in dbm for [ENSG00000132967.9]
WARNING, no entry stored in dbm for [ENSG00000265469.1]
WARNING, no entry stored in dbm for [ENSG00000226121.2]
WARNING, no entry stored in dbm for [ENSG00000250698.1]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000225777.1]
WARNING, no entry stored in dbm for [ENSG00000217241.1]
WARNING, no entry stored in dbm for [ENSG00000255401.1]
WARNING, no entry stored in dbm for [ENSG00000269350.1]
WARNING, no entry stored in dbm for [ENSG00000227165.9]
WARNING, no entry stored in dbm for [ENSG00000270670.1]
WARNING, no entry stored in dbm for [ENSG00000268894.7]
WARNING, no entry stored in dbm for [ENSG00000238082.1]
WARNING, no entry stored in dbm for [ENSG00000280138.1]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
WARNING, no entry stored in dbm for [ENSG00000246582.3]
WARNING, no entry stored in dbm for [ENSG00000227205.4]
WARNING, no entry stored in dbm for [ENSG00000231826.6]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000280739.3]
WARNING, no entry stored in dbm for [ENSG00000286027.1]
WARNING, no entry stored in dbm for [ENSG00000247774.7]
WARNING, no entry stored in dbm for [ENSG00000225937.3]
WARNING, no entry stored in dbm for [ENSG00000250825.1]
WARNING, no entry stored in dbm for [ENSG00000152117.17]
WARNING, no entry stored in dbm for [ENSG00000255875.2]
WARNING, no entry stored in dbm for [ENSG00000286504.1]
WARNING, no entry stored in dbm for [ENSG00000180438.15]
WARNING, no entry stored in dbm for [ENSG00000254917.1]
WARNING, no entry stored in dbm for [ENSG00000267154.1]
WARNING, no entry stored in dbm for [ENSG00000287765.1]
WARNING, no entry stored in dbm for [ENSG00000260005.6]
WARNING, no entry stored in dbm for [ENSG00000226328.7]
WARNING, no entry stored in dbm for [ENSG00000260254.1]
WARNING, no entry stored in dbm for [ENSG00000281903.2]
WARNING, no entry stored in dbm for [ENSG00000244230.3]
WARNING, no entry stored in dbm for [ENSG00000250251.6]
WARNING, no entry stored in dbm for [ENSG00000266904.6]
WARNING, no entry stored in dbm for [ENSG00000267486.1]
WARNING, no entry stored in dbm for [ENSG00000240489.1]
WARNING, no entry stored in dbm for [ENSG00000201648.1]
WARNING, no entry stored in dbm for [ENSG00000234226.5]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000254468.2]
WARNING, no entry stored in dbm for [ENSG00000205449.11]
WARNING, no entry stored in dbm for [ENSG00000205449.11]
WARNING, no entry stored in dbm for [ENSG00000205449.11]
WARNING, no entry stored in dbm for [ENSG00000205449.11]
WARNING, no entry stored in dbm for [ENSG00000205449.11]
WARNING, no entry stored in dbm for [ENSG00000203739.4]
WARNING, no entry stored in dbm for [ENSG00000258792.4]
WARNING, no entry stored in dbm for [ENSG00000251034.2]
WARNING, no entry stored in dbm for [ENSG00000250971.3]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000224296.3]
WARNING, no entry stored in dbm for [ENSG00000287562.1]
WARNING, no entry stored in dbm for [ENSG00000245651.3]
WARNING, no entry stored in dbm for [ENSG00000232862.5]
WARNING, no entry stored in dbm for [ENSG00000288108.1]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000242756.2]
WARNING, no entry stored in dbm for [ENSG00000234323.8]
WARNING, no entry stored in dbm for [ENSG00000230569.1]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000288617.1]
WARNING, no entry stored in dbm for [ENSG00000241345.1]
WARNING, no entry stored in dbm for [ENSG00000279935.1]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000131002.12]
WARNING, no entry stored in dbm for [ENSG00000286295.1]
WARNING, no entry stored in dbm for [ENSG00000248810.2]
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [ENSG00000242529.1]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000260317.1]
WARNING, no entry stored in dbm for [ENSG00000100068.14]
WARNING, no entry stored in dbm for [ENSG00000258912.2]
WARNING, no entry stored in dbm for [ENSG00000237638.2]
WARNING, no entry stored in dbm for [ENSG00000248693.1]
WARNING, no entry stored in dbm for [ENSG00000230102.8]
WARNING, no entry stored in dbm for [ENSG00000262188.2]
WARNING, no entry stored in dbm for [ENSG00000251675.1]
WARNING, no entry stored in dbm for [ENSG00000255171.7]
WARNING, no entry stored in dbm for [ENSG00000224017.2]
WARNING, no entry stored in dbm for [ENSG00000223823.1]
WARNING, no entry stored in dbm for [ENSG00000228262.10]
WARNING, no entry stored in dbm for [ENSG00000224577.3]
WARNING, no entry stored in dbm for [ENSG00000237248.5]
WARNING, no entry stored in dbm for [ENSG00000229240.9]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000215190.9]
WARNING, no entry stored in dbm for [ENSG00000239650.4]
WARNING, no entry stored in dbm for [ENSG00000223546.7]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000250585.3]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000228221.6]
WARNING, no entry stored in dbm for [ENSG00000236242.1]
WARNING, no entry stored in dbm for [ENSG00000233124.2]
WARNING, no entry stored in dbm for [ENSG00000254860.6]
WARNING, no entry stored in dbm for [ENSG00000214110.3]
WARNING, no entry stored in dbm for [ENSG00000224699.9]
WARNING, no entry stored in dbm for [ENSG00000257616.1]
WARNING, no entry stored in dbm for [ENSG00000274928.6]
WARNING, no entry stored in dbm for [ENSG00000271231.1]
WARNING, no entry stored in dbm for [ENSG00000250363.1]
WARNING, no entry stored in dbm for [ENSG00000266820.1]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000239569.3]
WARNING, no entry stored in dbm for [ENSG00000233652.1]
WARNING, no entry stored in dbm for [ENSG00000189223.15]
WARNING, no entry stored in dbm for [ENSG00000260746.2]
WARNING, no entry stored in dbm for [ENSG00000285079.1]
WARNING, no entry stored in dbm for [ENSG00000246174.9]
WARNING, no entry stored in dbm for [ENSG00000200087.1]
WARNING, no entry stored in dbm for [ENSG00000235257.9]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000243970.3]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000276050.1]
WARNING, no entry stored in dbm for [ENSG00000259583.3]
WARNING, no entry stored in dbm for [ENSG00000080947.15]
WARNING, no entry stored in dbm for [ENSG00000253774.1]
WARNING, no entry stored in dbm for [ENSG00000248909.1]
WARNING, no entry stored in dbm for [ENSG00000206337.12]
WARNING, no entry stored in dbm for [ENSG00000258017.2]
WARNING, no entry stored in dbm for [ENSG00000198237.8]
WARNING, no entry stored in dbm for [ENSG00000247679.3]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000231881.2]
WARNING, no entry stored in dbm for [ENSG00000223703.1]
WARNING, no entry stored in dbm for [ENSG00000173295.8]
WARNING, no entry stored in dbm for [ENSG00000197308.9]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000196295.12]
WARNING, no entry stored in dbm for [ENSG00000196295.12]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000236120.7]
WARNING, no entry stored in dbm for [ENSG00000253474.2]
WARNING, no entry stored in dbm for [ENSG00000203801.8]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000232855.7]
WARNING, no entry stored in dbm for [ENSG00000272078.1]
WARNING, no entry stored in dbm for [ENSG00000223652.2]
WARNING, no entry stored in dbm for [ENSG00000215035.2]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000239572.3]
WARNING, no entry stored in dbm for [ENSG00000231655.1]
WARNING, no entry stored in dbm for [ENSG00000235927.4]
WARNING, no entry stored in dbm for [ENSG00000234345.2]
WARNING, no entry stored in dbm for [ENSG00000226232.8]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000249244.1]
WARNING, no entry stored in dbm for [ENSG00000257588.1]
WARNING, no entry stored in dbm for [ENSG00000225383.8]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000227195.11]
WARNING, no entry stored in dbm for [ENSG00000248079.3]
WARNING, no entry stored in dbm for [ENSG00000284128.1]
WARNING, no entry stored in dbm for [ENSG00000231684.3]
WARNING, no entry stored in dbm for [ENSG00000235218.2]
WARNING, no entry stored in dbm for [ENSG00000100068.14]
WARNING, no entry stored in dbm for [ENSG00000261888.1]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000283907.1]
WARNING, no entry stored in dbm for [ENSG00000240639.3]
WARNING, no entry stored in dbm for [ENSG00000226609.2]
WARNING, no entry stored in dbm for [ENSG00000273344.1]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000245293.3]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000186543.7]
WARNING, no entry stored in dbm for [ENSG00000258551.6]
WARNING, no entry stored in dbm for [ENSG00000284471.1]
WARNING, no entry stored in dbm for [ENSG00000260318.1]
WARNING, no entry stored in dbm for [ENSG00000236360.2]
WARNING, no entry stored in dbm for [ENSG00000246214.2]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000274414.1]
WARNING, no entry stored in dbm for [ENSG00000235618.8]
WARNING, no entry stored in dbm for [ENSG00000274508.1]
WARNING, no entry stored in dbm for [ENSG00000271366.1]
WARNING, no entry stored in dbm for [ENSG00000246366.6]
WARNING, no entry stored in dbm for [ENSG00000251643.1]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000250360.1]
WARNING, no entry stored in dbm for [ENSG00000233098.9]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000229182.3]
WARNING, no entry stored in dbm for [ENSG00000231312.7]
WARNING, no entry stored in dbm for [ENSG00000249375.8]
WARNING, no entry stored in dbm for [ENSG00000248969.1]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000288029.1]
WARNING, no entry stored in dbm for [ENSG00000236052.2]
WARNING, no entry stored in dbm for [ENSG00000231698.2]
WARNING, no entry stored in dbm for [ENSG00000205930.10]
WARNING, no entry stored in dbm for [ENSG00000162888.4]
WARNING, no entry stored in dbm for [ENSG00000286176.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285867.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000214035.3]
WARNING, no entry stored in dbm for [ENSG00000242193.11]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000279022.1]
WARNING, no entry stored in dbm for [ENSG00000242267.6]
WARNING, no entry stored in dbm for [ENSG00000262117.5]
WARNING, no entry stored in dbm for [ENSG00000254560.6]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000237187.9]
WARNING, no entry stored in dbm for [ENSG00000242561.1]
WARNING, no entry stored in dbm for [ENSG00000214900.11]
WARNING, no entry stored in dbm for [ENSG00000236772.1]
WARNING, no entry stored in dbm for [ENSG00000257087.1]
WARNING, no entry stored in dbm for [ENSG00000278181.1]
WARNING, no entry stored in dbm for [ENSG00000260105.6]
WARNING, no entry stored in dbm for [ENSG00000259234.6]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000233230.1]
WARNING, no entry stored in dbm for [ENSG00000244380.1]
WARNING, no entry stored in dbm for [ENSG00000231043.3]
WARNING, no entry stored in dbm for [ENSG00000254978.2]
WARNING, no entry stored in dbm for [ENSG00000254978.2]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000250268.3]
WARNING, no entry stored in dbm for [ENSG00000286895.1]
WARNING, no entry stored in dbm for [ENSG00000226168.1]
WARNING, no entry stored in dbm for [ENSG00000238260.1]
WARNING, no entry stored in dbm for [ENSG00000285103.2]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000235020.5]
WARNING, no entry stored in dbm for [ENSG00000247287.3]
WARNING, no entry stored in dbm for [ENSG00000233216.1]
WARNING, no entry stored in dbm for [ENSG00000279096.2]
WARNING, no entry stored in dbm for [ENSG00000259162.1]
WARNING, no entry stored in dbm for [ENSG00000276502.1]
WARNING, no entry stored in dbm for [ENSG00000259133.5]
WARNING, no entry stored in dbm for [ENSG00000261060.1]
WARNING, no entry stored in dbm for [ENSG00000197670.6]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000285664.2]
WARNING, no entry stored in dbm for [ENSG00000286594.1]
WARNING, no entry stored in dbm for [ENSG00000244733.5]
WARNING, no entry stored in dbm for [ENSG00000265630.2]
WARNING, no entry stored in dbm for [ENSG00000271803.1]
WARNING, no entry stored in dbm for [ENSG00000226812.2]
WARNING, no entry stored in dbm for [ENSG00000259515.1]
WARNING, no entry stored in dbm for [ENSG00000237686.7]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000288028.1]
WARNING, no entry stored in dbm for [ENSG00000230492.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000176515.1]
WARNING, no entry stored in dbm for [ENSG00000280434.1]
WARNING, no entry stored in dbm for [ENSG00000227775.3]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000252777.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000230153.5]
WARNING, no entry stored in dbm for [ENSG00000248692.5]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000286912.1]
WARNING, no entry stored in dbm for [ENSG00000241473.1]
WARNING, no entry stored in dbm for [ENSG00000253853.3]
WARNING, no entry stored in dbm for [ENSG00000240197.1]
WARNING, no entry stored in dbm for [ENSG00000276216.1]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000275121.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000242073.2]
WARNING, no entry stored in dbm for [ENSG00000279630.1]
WARNING, no entry stored in dbm for [ENSG00000249981.1]
WARNING, no entry stored in dbm for [ENSG00000256982.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000260507.1]
WARNING, no entry stored in dbm for [ENSG00000268555.2]
WARNING, no entry stored in dbm for [ENSG00000283602.1]
WARNING, no entry stored in dbm for [ENSG00000243199.1]
WARNING, no entry stored in dbm for [ENSG00000216754.2]
WARNING, no entry stored in dbm for [ENSG00000224814.1]
WARNING, no entry stored in dbm for [ENSG00000236665.1]
WARNING, no entry stored in dbm for [ENSG00000272078.1]
WARNING, no entry stored in dbm for [ENSG00000239920.2]
WARNING, no entry stored in dbm for [ENSG00000254153.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000277096.1]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000242759.8]
WARNING, no entry stored in dbm for [ENSG00000285591.1]
WARNING, no entry stored in dbm for [ENSG00000188365.3]
WARNING, no entry stored in dbm for [ENSG00000279476.1]
WARNING, no entry stored in dbm for [ENSG00000260290.2]
WARNING, no entry stored in dbm for [ENSG00000260290.2]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000266965.1]
WARNING, no entry stored in dbm for [ENSG00000283914.1]
WARNING, no entry stored in dbm for [ENSG00000254645.2]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000241722.2]
WARNING, no entry stored in dbm for [ENSG00000267741.1]
WARNING, no entry stored in dbm for [ENSG00000257225.1]
WARNING, no entry stored in dbm for [ENSG00000257225.1]
WARNING, no entry stored in dbm for [ENSG00000269274.1]
WARNING, no entry stored in dbm for [ENSG00000234072.1]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000197099.8]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000254728.1]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000256802.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000267169.2]
WARNING, no entry stored in dbm for [ENSG00000239775.1]
WARNING, no entry stored in dbm for [ENSG00000239775.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000261526.2]
WARNING, no entry stored in dbm for [ENSG00000227400.2]
WARNING, no entry stored in dbm for [ENSG00000267723.1]
WARNING, no entry stored in dbm for [ENSG00000267265.5]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000272622.2]
WARNING, no entry stored in dbm for [ENSG00000257696.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000260908.1]
WARNING, no entry stored in dbm for [ENSG00000250258.1]
WARNING, no entry stored in dbm for [ENSG00000273489.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000263345.1]
WARNING, no entry stored in dbm for [ENSG00000287766.1]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000279726.2]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000232667.10]
WARNING, no entry stored in dbm for [ENSG00000280054.1]
WARNING, no entry stored in dbm for [ENSG00000255328.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.uAig78QKs0/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)