Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/d398d4c066b2dce27dd7f152251a7e/aih-tih-sc-bbc28d-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/9cffba5117df0bdf668ecbd049088b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/9cffba5117df0bdf668ecbd049088b/.command.run
==> STAGING COMPLETE (3 inputs)

PAIRED_END_BAM_INPUT
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Processed 349000000 records
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paired = 205186992
unpaired = 3478754
MERGED PAIRED END READS = 205186992
MATES PROCESSED = 413852738
TOTAL READS     = 208665746
DISTINCT READS  = 6.84382e+07
DISTINCT COUNTS = 1105
MAX COUNT       = 462129
COUNTS OF 1     = 2.6323e+07
MAX TERMS       = 100
OBSERVED COUNTS (462130)
1	26322964
2	14964286
3	9464988
4	5990809
5	3788907
6	2406827
7	1552523
8	1021245
9	691985
10	481563
11	344027
12	253510
13	190009
14	146564
15	114314
16	91077
17	73514
18	60490
19	50214
20	41856
21	35611
22	30857
23	26445
24	22936
25	20201
26	17764
27	15844
28	14042
29	12442
30	11294
31	10366
32	9213
33	8516
34	7957
35	7177
36	6599
37	6022
38	5598
39	5249
40	4940
41	4477
42	4119
43	3902
44	3555
45	3355
46	3351
47	3031
48	2933
49	2755
50	2569
51	2333
52	2293
53	2233
54	2079
55	1995
56	1870
57	1782
58	1655
59	1549
60	1532
61	1430
62	1465
63	1336
64	1286
65	1278
66	1123
67	1134
68	1114
69	1012
70	1100
71	991
72	928
73	854
74	857
75	836
76	838
77	805
78	747
79	740
80	665
81	727
82	632
83	656
84	612
85	630
86	613
87	597
88	552
89	529
90	528
91	515
92	500
93	474
94	460
95	476
96	413
97	456
98	396
99	415
100	360
101	404
102	388
103	353
104	353
105	341
106	337
107	339
108	344
109	263
110	292
111	273
112	287
113	315
114	249
115	272
116	270
117	265
118	248
119	237
120	219
121	249
122	206
123	245
124	238
125	232
126	206
127	209
128	202
129	189
130	205
131	200
132	209
133	173
134	175
135	154
136	168
137	153
138	168
139	163
140	174
141	161
142	158
143	159
144	159
145	135
146	141
147	145
148	134
149	127
150	146
151	149
152	123
153	121
154	142
155	113
156	98
157	113
158	117
159	112
160	110
161	104
162	110
163	115
164	100
165	120
166	87
167	100
168	93
169	96
170	90
171	90
172	110
173	84
174	85
175	94
176	99
177	73
178	93
179	93
180	93
181	98
182	77
183	76
184	78
185	67
186	73
187	89
188	86
189	79
190	71
191	64
192	58
193	74
194	62
195	60
196	66
197	77
198	74
199	64
200	61
201	57
202	58
203	59
204	69
205	66
206	55
207	56
208	54
209	61
210	66
211	51
212	45
213	57
214	66
215	49
216	46
217	49
218	56
219	45
220	54
221	51
222	49
223	44
224	50
225	49
226	51
227	45
228	46
229	35
230	55
231	44
232	35
233	42
234	46
235	39
236	37
237	36
238	47
239	44
240	36
241	33
242	40
243	41
244	32
245	48
246	40
247	47
248	46
249	39
250	33
251	38
252	34
253	36
254	38
255	37
256	41
257	33
258	21
259	28
260	27
261	32
262	37
263	31
264	25
265	39
266	27
267	29
268	34
269	30
270	33
271	31
272	26
273	25
274	22
275	28
276	28
277	35
278	29
279	23
280	19
281	22
282	25
283	17
284	23
285	23
286	24
287	24
288	27
289	31
290	20
291	22
292	20
293	27
294	20
295	14
296	20
297	15
298	21
299	19
300	14
301	22
302	24
303	22
304	25
305	15
306	21
307	20
308	19
309	19
310	23
311	20
312	11
313	21
314	18
315	19
316	17
317	13
318	18
319	19
320	24
321	22
322	13
323	20
324	13
325	17
326	10
327	18
328	16
329	19
330	6
331	22
332	14
333	11
334	10
335	22
336	14
337	19
338	10
339	18
340	9
341	17
342	16
343	13
344	11
345	12
346	11
347	10
348	9
349	13
350	12
351	9
352	13
353	22
354	12
355	12
356	9
357	14
358	11
359	13
360	9
361	13
362	11
363	11
364	15
365	10
366	7
367	9
368	13
369	12
370	17
371	14
372	10
373	10
374	17
375	10
376	8
377	15
378	13
379	14
380	12
381	20
382	6
383	11
384	12
385	6
386	9
387	8
388	8
389	11
390	5
391	12
392	5
393	8
394	13
395	9
396	15
397	11
398	15
399	11
400	10
401	8
402	4
403	7
404	16
405	8
406	9
407	14
408	8
409	11
410	12
411	8
412	9
413	11
414	6
415	7
416	2
417	10
418	3
419	13
420	6
421	4
422	11
423	7
424	10
425	7
426	13
427	8
428	9
429	7
430	8
431	9
432	1
433	7
434	5
435	7
436	6
437	4
438	11
439	4
440	3
441	8
442	3
443	9
444	4
445	5
446	7
447	5
448	6
449	5
450	3
451	6
452	8
453	9
454	2
455	4
456	4
457	5
458	4
459	7
460	7
461	5
462	9
463	9
464	9
465	7
466	11
467	1
468	5
469	3
470	5
471	9
472	4
473	7
474	8
475	6
476	7
477	6
478	2
479	5
480	2
481	10
482	6
483	5
484	5
485	6
486	1
487	4
488	4
489	5
490	4
491	1
492	4
493	6
494	7
495	5
496	6
497	6
498	9
499	9
500	5
501	6
502	1
503	4
504	10
505	4
506	5
507	4
508	8
509	4
510	5
511	3
512	7
513	4
514	2
515	1
516	3
517	7
518	6
519	4
520	6
521	6
522	5
523	6
524	3
525	4
526	5
527	7
528	1
529	3
530	4
531	3
532	4
533	4
534	5
535	4
536	8
537	3
538	3
539	3
540	3
541	1
542	4
544	6
545	3
546	8
547	4
548	4
549	4
550	4
551	7
552	4
553	2
554	2
555	5
556	3
557	2
558	1
559	4
560	6
561	8
562	6
563	10
564	3
565	3
566	1
567	4
568	1
569	6
570	6
571	4
572	3
573	8
575	1
576	1
577	3
578	5
579	3
580	7
581	2
583	3
584	3
585	3
586	2
587	3
588	1
589	2
590	3
591	6
592	6
593	1
594	3
595	1
596	5
597	5
598	12
599	4
600	3
601	5
602	1
603	3
604	3
605	5
606	2
607	3
608	7
609	3
610	5
611	2
612	1
613	5
614	5
615	2
616	2
617	2
618	1
619	1
621	1
622	3
623	8
624	1
625	2
626	1
627	4
628	1
629	6
630	4
631	2
632	3
633	5
634	1
635	1
636	3
637	3
638	2
639	1
640	2
642	1
643	2
644	1
645	3
646	4
647	3
648	1
649	2
650	4
651	1
652	2
653	4
654	1
655	8
656	2
657	4
658	2
659	1
661	5
662	5
663	3
665	1
666	5
667	3
668	2
669	1
670	2
671	1
673	2
674	3
675	2
676	1
677	2
678	1
685	6
686	3
687	1
688	3
690	2
691	1
693	1
695	1
696	2
697	2
698	3
699	3
700	3
701	3
702	3
705	3
707	1
708	2
709	2
710	2
712	1
713	3
714	4
716	2
717	1
718	2
719	2
720	2
721	2
722	1
723	2
724	1
725	1
727	3
729	5
730	1
731	1
732	1
734	1
735	1
736	2
737	3
738	2
740	1
741	1
742	1
743	2
744	1
745	2
746	3
747	2
748	2
749	1
750	1
751	2
752	2
753	2
755	4
757	1
759	1
760	1
762	1
764	1
765	1
766	1
767	1
768	4
769	2
770	2
771	2
772	1
773	2
775	1
777	1
782	3
783	1
784	3
785	1
787	1
788	1
791	1
793	1
794	2
795	2
796	3
797	1
799	1
801	3
802	2
803	1
804	2
807	2
808	1
809	3
810	2
811	2
813	1
814	1
815	1
816	2
817	2
818	1
820	1
821	1
822	1
825	1
826	2
827	3
828	1
831	1
832	2
833	1
834	2
835	1
836	1
838	1
839	2
840	1
842	1
843	1
844	2
845	1
846	1
847	2
849	2
850	1
852	2
854	1
855	1
858	2
859	2
860	1
862	1
864	2
865	2
866	2
867	1
868	1
869	2
870	2
871	1
872	1
873	1
874	1
875	1
877	2
879	2
880	1
882	1
883	2
884	4
885	1
886	2
887	1
889	1
890	1
893	3
894	1
896	3
897	1
898	2
899	1
901	2
905	1
906	3
912	1
914	1
916	1
917	2
922	2
923	4
924	1
925	3
926	1
927	1
934	1
941	1
944	2
946	1
948	2
950	1
951	1
953	2
957	1
958	1
959	1
962	1
964	1
966	2
967	3
968	3
970	1
971	1
974	3
977	1
978	1
979	1
983	2
984	1
985	1
988	2
994	1
995	1
997	2
998	1
999	1
1002	2
1003	1
1004	1
1005	1
1006	1
1007	2
1011	1
1012	1
1015	1
1016	2
1021	1
1029	1
1032	1
1034	2
1035	1
1036	1
1037	1
1041	1
1045	1
1046	1
1047	3
1051	3
1052	1
1055	1
1059	1
1060	1
1064	1
1066	1
1069	1
1070	2
1072	1
1074	1
1076	1
1077	1
1080	2
1083	2
1090	1
1097	1
1099	2
1100	1
1103	1
1105	2
1108	1
1109	1
1115	2
1120	1
1121	1
1123	1
1126	1
1131	1
1134	2
1138	1
1140	2
1142	1
1143	1
1151	1
1155	2
1156	2
1157	1
1160	2
1166	2
1175	1
1176	2
1183	1
1188	1
1195	1
1200	1
1201	1
1204	1
1217	1
1223	2
1232	1
1234	1
1235	1
1239	1
1240	1
1250	1
1254	1
1271	2
1280	2
1296	1
1297	1
1305	1
1309	2
1313	1
1314	1
1326	2
1327	1
1329	1
1345	1
1349	1
1354	1
1365	1
1368	1
1372	1
1376	1
1379	1
1388	1
1395	1
1397	1
1400	1
1407	1
1414	1
1415	1
1426	1
1432	1
1439	1
1443	1
1452	2
1454	1
1461	1
1464	1
1477	1
1484	1
1488	1
1496	1
1504	1
1505	1
1520	1
1526	1
1543	1
1552	1
1555	2
1558	1
1563	1
1570	3
1573	1
1595	1
1598	2
1602	1
1603	1
1608	1
1630	1
1635	1
1639	1
1656	1
1660	1
1661	1
1688	1
1699	1
1709	1
1721	1
1722	1
1731	1
1732	1
1762	1
1764	1
1765	1
1770	1
1771	1
1782	1
1795	1
1806	2
1860	1
1899	1
1908	1
1912	1
1913	1
1936	1
1937	1
1939	2
1947	1
1982	1
1989	1
1991	1
1993	1
1998	1
2001	1
2008	1
2010	1
2017	1
2023	1
2024	1
2047	1
2058	1
2076	1
2077	1
2089	1
2095	1
2105	1
2119	1
2120	1
2129	1
2178	1
2179	1
2198	1
2253	1
2275	1
2283	1
2289	1
2292	1
2330	1
2351	2
2425	1
2482	1
2502	1
2519	1
2567	1
2621	1
2631	1
2632	1
2792	1
2853	1
2865	1
2922	1
2943	1
2993	1
3021	1
3027	1
3068	1
3142	1
3198	1
3245	1
3258	1
3337	1
3386	1
3767	1
3865	1
3873	1
4070	1
4452	1
4636	1
4747	1
4927	1
5463	1
6188	1
8825	1
30134	1
462129	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
................................._......................................
.............................
[COMPUTING CONFIDENCE INTERVALS]
[WRITING OUTPUT]