File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/1635b82e0ada446532e5a6a80d9d9c/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:05:55
                             Started mapping on |	Jun 08 10:12:34
                                    Finished on |	Jun 08 11:16:32
       Mapping speed, Million of reads per hour |	268.76

                          Number of input reads |	286529817
                      Average input read length |	261
                                    UNIQUE READS:
                   Uniquely mapped reads number |	270603666
                        Uniquely mapped reads % |	94.44%
                          Average mapped length |	261.11
                       Number of splices: Total |	301923954
            Number of splices: Annotated (sjdb) |	295432200
                       Number of splices: GT/AG |	298620575
                       Number of splices: GC/AG |	2071839
                       Number of splices: AT/AC |	288608
               Number of splices: Non-canonical |	942932
                      Mismatch rate per base, % |	0.18%
                         Deletion rate per base |	0.01%
                        Deletion average length |	1.75
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.84
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	13232027
             % of reads mapped to multiple loci |	4.62%
        Number of reads mapped to too many loci |	195878
             % of reads mapped to too many loci |	0.07%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2239636
                 % of reads unmapped: too short |	0.78%
                Number of reads unmapped: other |	258610
                     % of reads unmapped: other |	0.09%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%