Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/ce9852f7124f1ce9a425b9e7d968cc/aih-tih-sc-607ec3-R1_A23YTGFLT4_1_2.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/44ca634df65018759ca1271867031c/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/44ca634df65018759ca1271867031c/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/ce9852f7124f1ce9a425b9e7d968cc/aih-tih-sc-607ec3-R1_A23YTGFLT4_1_1.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/62/c963080efd7afc751aaf13e47780ae/aih-tih-sc-607ec3-R1_A23YTGFLT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.fUUJhm545Q/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary
-sample contains 183773725 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir -J /tmp/nxf.fUUJhm545Q/aih-tih-sc-607ec3-R1_A23YTGFLT4_1.Chimeric.out.junction -O /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.fUUJhm545Q/aih-tih-sc-607ec3-R1_A23YTGFLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[1910000], rate=83103.70/min -building interval tree based on /tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[1890000], rate=78804.73/min -building interval tree based on /tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[1890000], rate=53189.49/min -building interval tree based on /tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=85714.29/min
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[1870000], rate=52626.64/min
[1880000], rate=52440.73/min
[1890000], rate=52233.99/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir --filt_file /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
6000000.00 reads per min processed...
9000000.00 reads per min processed...
8000000.00 reads per min processed...
10000000.00 reads per min processed...
9000000.00 reads per min processed...
7000000.00 reads per min processed...
6000000.00 reads per min processed...
5400000.00 reads per min processed...
5454545.45 reads per min processed...
5076923.08 reads per min processed...
4800000.00 reads per min processed...
4588235.29 reads per min processed...
4421052.63 reads per min processed...
4500000.00 reads per min processed...
4363636.36 reads per min processed...
4434782.61 reads per min processed...
4320000.00 reads per min processed...
4222222.22 reads per min processed...
4137931.03 reads per min processed...
4064516.13 reads per min processed...
4000000.00 reads per min processed...
3942857.14 reads per min processed...
3891891.89 reads per min processed...
3947368.42 reads per min processed...
3900000.00 reads per min processed...
3857142.86 reads per min processed...
3906976.74 reads per min processed...
3866666.67 reads per min processed...
3829787.23 reads per min processed...
3795918.37 reads per min processed...
3764705.88 reads per min processed...
3807692.31 reads per min processed...
3777777.78 reads per min processed...
3888888.89 reads per min processed...
3927272.73 reads per min processed...
3964285.71 reads per min processed...
4071428.57 reads per min processed...
4105263.16 reads per min processed...
4137931.03 reads per min processed...
4169491.53 reads per min processed...
4131147.54 reads per min processed...
4161290.32 reads per min processed...
4125000.00 reads per min processed...
4090909.09 reads per min processed...
4119402.99 reads per min processed...
4086956.52 reads per min processed...
4114285.71 reads per min processed...
4083333.33 reads per min processed...
4109589.04 reads per min processed...
4080000.00 reads per min processed...
4051948.05 reads per min processed...
4025316.46 reads per min processed...
4000000.00 reads per min processed...
3975903.61 reads per min processed...
3952941.18 reads per min processed...
3931034.48 reads per min processed...
3910112.36 reads per min processed...
3890109.89 reads per min processed...
3913043.48 reads per min processed...
3893617.02 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.fUUJhm545Q/aih-tih-sc-607ec3-R1_A23YTGFLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -353306.000583
EM: Round [1] log likelihood: -353037.387611
EM: Round [2] log likelihood: -352940.450779
EM: Round [3] log likelihood: -352894.527991
EM: Round [4] log likelihood: -352869.764559
EM: Round [5] log likelihood: -352855.442154
EM: Round [6] log likelihood: -352846.731097
EM: Round [7] log likelihood: -352841.182442
EM: Round [8] log likelihood: -352837.486486
EM: Round [9] log likelihood: -352834.919081
EM: Round [10] log likelihood: -352833.067012
EM: Round [11] log likelihood: -352831.686403
EM: Round [12] log likelihood: -352830.628150
EM: Round [13] log likelihood: -352829.797808
EM: Round [14] log likelihood: -352829.133475
EM: Round [15] log likelihood: -352828.593253
EM: Round [16] log likelihood: -352828.147936
EM: Round [17] log likelihood: -352827.776617
EM: Round [18] log likelihood: -352827.463968
EM: Round [19] log likelihood: -352827.198513
EM: Round [20] log likelihood: -352826.971498
EM: Round [21] log likelihood: -352826.776134
EM: Round [22] log likelihood: -352826.607081
EM: Round [23] log likelihood: -352826.460079
EM: Round [24] log likelihood: -352826.331696
EM: Round [25] log likelihood: -352826.219135
EM: Round [26] log likelihood: -352826.120098
EM: Round [27] log likelihood: -352826.032678
EM: Round [28] log likelihood: -352825.955286
EM: Round [29] log likelihood: -352825.886585
EM: Round [30] log likelihood: -352825.825446
EM: Round [31] log likelihood: -352825.770909
EM: Round [32] log likelihood: -352825.722154
EM: Round [33] log likelihood: -352825.678479
EM: Round [34] log likelihood: -352825.639278
EM: Round [35] log likelihood: -352825.604028
EM: Round [36] log likelihood: -352825.572275
EM: Round [37] log likelihood: -352825.543625
EM: Round [38] log likelihood: -352825.517733
EM: Round [39] log likelihood: -352825.494298
EM: Round [40] log likelihood: -352825.473055
EM: Round [41] log likelihood: -352825.453773
EM: Round [42] log likelihood: -352825.436246
EM: Round [43] log likelihood: -352825.420294
EM: Round [44] log likelihood: -352825.405757
EM: Round [45] log likelihood: -352825.392493
EM: Round [46] log likelihood: -352825.380376
EM: Round [47] log likelihood: -352825.369293
EM: Round [48] log likelihood: -352825.359146
EM: Round [49] log likelihood: -352825.349844
EM: Round [50] log likelihood: -352825.341309
EM: Round [51] log likelihood: -352825.333469
EM: Round [52] log likelihood: -352825.326260
EM: Round [53] log likelihood: -352825.319624
EM: Round [54] log likelihood: -352825.313511
EM: Round [55] log likelihood: -352825.307873
EM: Round [56] log likelihood: -352825.302669
EM: Round [57] log likelihood: -352825.297861
EM: Round [58] log likelihood: -352825.293415
EM: Round [59] log likelihood: -352825.289300
EM: Round [60] log likelihood: -352825.285488
EM: Round [61] log likelihood: -352825.281955
EM: Round [62] log likelihood: -352825.278676
EM: Round [63] log likelihood: -352825.275631
EM: Round [64] log likelihood: -352825.272802
EM: Round [65] log likelihood: -352825.270170
EM: Round [66] log likelihood: -352825.267720
EM: Round [67] log likelihood: -352825.265439
EM: Round [68] log likelihood: -352825.263312
EM: Round [69] log likelihood: -352825.261328
EM: Round [70] log likelihood: -352825.259476
EM: Round [71] log likelihood: -352825.257746
EM: Round [72] log likelihood: -352825.256129
EM: Round [73] log likelihood: -352825.254616
EM: Round [74] log likelihood: -352825.253199
EM: Round [75] log likelihood: -352825.251873
EM: Round [76] log likelihood: -352825.250629
EM: Round [77] log likelihood: -352825.249463
EM: Round [78] log likelihood: -352825.248368
EM: Round [79] log likelihood: -352825.247340
EM: Round [80] log likelihood: -352825.246374
EM: Round [81] log likelihood: -352825.245465
EM: Round [82] log likelihood: -352825.244610
EM: Round [83] log likelihood: -352825.243806
EM: Round [84] log likelihood: -352825.243047
EM: Round [85] log likelihood: -352825.242332
EM: Round [86] log likelihood: -352825.241658
EM: Round [87] log likelihood: -352825.241022
EM: Round [88] log likelihood: -352825.240421
EM: Round [89] log likelihood: -352825.239853
EM: Round [90] log likelihood: -352825.239316
EM: Round [91] log likelihood: -352825.238808
EM: Round [92] log likelihood: -352825.238327
EM: Round [93] log likelihood: -352825.237871
EM: Round [94] log likelihood: -352825.237440
EM: Round [95] log likelihood: -352825.237030
EM: Round [96] log likelihood: -352825.236642
EM: Round [97] log likelihood: -352825.236273
EM: Round [98] log likelihood: -352825.235923
EM: Round [99] log likelihood: -352825.235590
EM: Round [100] log likelihood: -352825.235273
EM: Round [101] log likelihood: -352825.234972
EM: Round [102] log likelihood: -352825.234685
EM: Round [103] log likelihood: -352825.234412
EM: Round [104] log likelihood: -352825.234152
EM: Round [105] log likelihood: -352825.233903
EM: Round [106] log likelihood: -352825.233666
EM: Round [107] log likelihood: -352825.233440
EM: Round [108] log likelihood: -352825.233223
EM: Round [109] log likelihood: -352825.233017
EM: Round [110] log likelihood: -352825.232819
EM: Round [111] log likelihood: -352825.232630
EM: Round [112] log likelihood: -352825.232448
EM: Round [113] log likelihood: -352825.232275
EM: Round [114] log likelihood: -352825.232108
EM: Round [115] log likelihood: -352825.231949
EM: Round [116] log likelihood: -352825.231796
EM: Round [117] log likelihood: -352825.231649
EM: Round [118] log likelihood: -352825.231507
EM: Round [119] log likelihood: -352825.231371
EM: Round [120] log likelihood: -352825.231241
EM: Round [121] log likelihood: -352825.231115
EM: Round [122] log likelihood: -352825.230994
EM: Round [123] log likelihood: -352825.230878
EM: Round [124] log likelihood: -352825.230765
EM: Round [125] log likelihood: -352825.230657
EM: Round [126] log likelihood: -352825.230552
EM: Round [127] log likelihood: -352825.230451
EM: Round [128] log likelihood: -352825.230354
EM: Stopping iterations at round 128 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -352951.997892
EM: Round [1] log likelihood: -352721.302208
EM: Round [2] log likelihood: -352642.514233
EM: Round [3] log likelihood: -352606.723454
EM: Round [4] log likelihood: -352587.967938
EM: Round [5] log likelihood: -352577.303068
EM: Round [6] log likelihood: -352570.875431
EM: Round [7] log likelihood: -352566.800580
EM: Round [8] log likelihood: -352564.093170
EM: Round [9] log likelihood: -352562.214777
EM: Round [10] log likelihood: -352560.859932
EM: Round [11] log likelihood: -352559.848955
EM: Round [12] log likelihood: -352559.072317
EM: Round [13] log likelihood: -352558.460885
EM: Round [14] log likelihood: -352557.969532
EM: Round [15] log likelihood: -352557.567854
EM: Round [16] log likelihood: -352557.234753
EM: Round [17] log likelihood: -352556.955191
EM: Round [18] log likelihood: -352556.718180
EM: Round [19] log likelihood: -352556.515515
EM: Round [20] log likelihood: -352556.340948
EM: Round [21] log likelihood: -352556.189635
EM: Round [22] log likelihood: -352556.057762
EM: Round [23] log likelihood: -352555.942287
EM: Round [24] log likelihood: -352555.840747
EM: Round [25] log likelihood: -352555.751131
EM: Round [26] log likelihood: -352555.671780
EM: Round [27] log likelihood: -352555.601312
EM: Round [28] log likelihood: -352555.538564
EM: Round [29] log likelihood: -352555.482559
EM: Round [30] log likelihood: -352555.432461
EM: Round [31] log likelihood: -352555.387556
EM: Round [32] log likelihood: -352555.347233
EM: Round [33] log likelihood: -352555.310961
EM: Round [34] log likelihood: -352555.278281
EM: Round [35] log likelihood: -352555.248792
EM: Round [36] log likelihood: -352555.222146
EM: Round [37] log likelihood: -352555.198037
EM: Round [38] log likelihood: -352555.176195
EM: Round [39] log likelihood: -352555.156383
EM: Round [40] log likelihood: -352555.138392
EM: Round [41] log likelihood: -352555.122036
EM: Round [42] log likelihood: -352555.107151
EM: Round [43] log likelihood: -352555.093591
EM: Round [44] log likelihood: -352555.081226
EM: Round [45] log likelihood: -352555.069940
EM: Round [46] log likelihood: -352555.059628
EM: Round [47] log likelihood: -352555.050198
EM: Round [48] log likelihood: -352555.041568
EM: Round [49] log likelihood: -352555.033662
EM: Round [50] log likelihood: -352555.026413
EM: Round [51] log likelihood: -352555.019762
EM: Round [52] log likelihood: -352555.013654
EM: Round [53] log likelihood: -352555.008041
EM: Round [54] log likelihood: -352555.002877
EM: Round [55] log likelihood: -352554.998124
EM: Round [56] log likelihood: -352554.993746
EM: Round [57] log likelihood: -352554.989709
EM: Round [58] log likelihood: -352554.985985
EM: Round [59] log likelihood: -352554.982546
EM: Round [60] log likelihood: -352554.979370
EM: Round [61] log likelihood: -352554.976432
EM: Round [62] log likelihood: -352554.973714
EM: Round [63] log likelihood: -352554.971198
EM: Round [64] log likelihood: -352554.968866
EM: Round [65] log likelihood: -352554.966705
EM: Round [66] log likelihood: -352554.964699
EM: Round [67] log likelihood: -352554.962836
EM: Round [68] log likelihood: -352554.961106
EM: Round [69] log likelihood: -352554.959498
EM: Round [70] log likelihood: -352554.958001
EM: Round [71] log likelihood: -352554.956608
EM: Round [72] log likelihood: -352554.955310
EM: Round [73] log likelihood: -352554.954101
EM: Round [74] log likelihood: -352554.952972
EM: Round [75] log likelihood: -352554.951919
EM: Round [76] log likelihood: -352554.950936
EM: Round [77] log likelihood: -352554.950017
EM: Round [78] log likelihood: -352554.949157
EM: Round [79] log likelihood: -352554.948353
EM: Round [80] log likelihood: -352554.947600
EM: Round [81] log likelihood: -352554.946895
EM: Round [82] log likelihood: -352554.946233
EM: Round [83] log likelihood: -352554.945613
EM: Round [84] log likelihood: -352554.945031
EM: Round [85] log likelihood: -352554.944484
EM: Round [86] log likelihood: -352554.943970
EM: Round [87] log likelihood: -352554.943486
EM: Round [88] log likelihood: -352554.943031
EM: Round [89] log likelihood: -352554.942603
EM: Round [90] log likelihood: -352554.942200
EM: Round [91] log likelihood: -352554.941819
EM: Round [92] log likelihood: -352554.941460
EM: Round [93] log likelihood: -352554.941121
EM: Round [94] log likelihood: -352554.940801
EM: Round [95] log likelihood: -352554.940499
EM: Round [96] log likelihood: -352554.940213
EM: Round [97] log likelihood: -352554.939942
EM: Round [98] log likelihood: -352554.939686
EM: Round [99] log likelihood: -352554.939443
EM: Round [100] log likelihood: -352554.939212
EM: Round [101] log likelihood: -352554.938994
EM: Round [102] log likelihood: -352554.938786
EM: Round [103] log likelihood: -352554.938589
EM: Round [104] log likelihood: -352554.938402
EM: Round [105] log likelihood: -352554.938224
EM: Round [106] log likelihood: -352554.938054
EM: Round [107] log likelihood: -352554.937892
EM: Round [108] log likelihood: -352554.937738
EM: Round [109] log likelihood: -352554.937591
EM: Round [110] log likelihood: -352554.937451
EM: Round [111] log likelihood: -352554.937317
EM: Round [112] log likelihood: -352554.937189
EM: Round [113] log likelihood: -352554.937067
EM: Round [114] log likelihood: -352554.936950
EM: Round [115] log likelihood: -352554.936838
EM: Round [116] log likelihood: -352554.936730
EM: Round [117] log likelihood: -352554.936627
EM: Round [118] log likelihood: -352554.936528
EM: Stopping iterations at round 118 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 183773725 > /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir > /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir --annotate /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir
-done, see /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1909, filtered: 11639)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.fUUJhm545Q/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.fUUJhm545Q/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000245958.6]
WARNING, no entry stored in dbm for [ENSG00000243753.5]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000214837.8]
WARNING, no entry stored in dbm for [ENSG00000239883.8]
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WARNING, no entry stored in dbm for [ENSG00000243980.3]
WARNING, no entry stored in dbm for [ENSG00000263740.2]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
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WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
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WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
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WARNING, no entry stored in dbm for [ENSG00000241104.5]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
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WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000241278.1]
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WARNING, no entry stored in dbm for [ENSG00000239470.3]
WARNING, no entry stored in dbm for [ENSG00000225482.1]
WARNING, no entry stored in dbm for [ENSG00000250251.6]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000273125.2]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000254934.5]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
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WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000279738.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
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WARNING, no entry stored in dbm for [ENSG00000170089.15]
WARNING, no entry stored in dbm for [ENSG00000285704.1]
WARNING, no entry stored in dbm for [ENSG00000287578.1]
WARNING, no entry stored in dbm for [ENSG00000217769.4]
WARNING, no entry stored in dbm for [ENSG00000231187.3]
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WARNING, no entry stored in dbm for [ENSG00000277977.1]
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WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000271466.1]
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WARNING, no entry stored in dbm for [ENSG00000260534.1]
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WARNING, no entry stored in dbm for [ENSG00000185684.15]
WARNING, no entry stored in dbm for [ENSG00000278733.1]
WARNING, no entry stored in dbm for [ENSG00000271523.1]
WARNING, no entry stored in dbm for [ENSG00000231328.1]
WARNING, no entry stored in dbm for [ENSG00000214558.4]
WARNING, no entry stored in dbm for [ENSG00000224281.5]
WARNING, no entry stored in dbm for [ENSG00000099869.8]
WARNING, no entry stored in dbm for [ENSG00000259666.3]
WARNING, no entry stored in dbm for [ENSG00000125514.9]
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WARNING, no entry stored in dbm for [ENSG00000234405.2]
WARNING, no entry stored in dbm for [ENSG00000264538.6]
WARNING, no entry stored in dbm for [ENSG00000280145.3]
WARNING, no entry stored in dbm for [ENSG00000232732.11]
WARNING, no entry stored in dbm for [ENSG00000265366.6]
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WARNING, no entry stored in dbm for [ENSG00000267959.3]
WARNING, no entry stored in dbm for [ENSG00000267122.1]
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WARNING, no entry stored in dbm for [ENSG00000268062.1]
WARNING, no entry stored in dbm for [ENSG00000248660.1]
WARNING, no entry stored in dbm for [ENSG00000280171.1]
WARNING, no entry stored in dbm for [ENSG00000270791.1]
WARNING, no entry stored in dbm for [ENSG00000241866.3]
WARNING, no entry stored in dbm for [ENSG00000248529.5]
WARNING, no entry stored in dbm for [ENSG00000279660.1]
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WARNING, no entry stored in dbm for [ENSG00000233399.2]
WARNING, no entry stored in dbm for [ENSG00000242474.3]
WARNING, no entry stored in dbm for [ENSG00000242207.1]
WARNING, no entry stored in dbm for [ENSG00000231878.1]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000255717.7]
WARNING, no entry stored in dbm for [ENSG00000241111.1]
WARNING, no entry stored in dbm for [ENSG00000287763.1]
WARNING, no entry stored in dbm for [ENSG00000270764.1]
WARNING, no entry stored in dbm for [ENSG00000203808.12]
WARNING, no entry stored in dbm for [ENSG00000285737.1]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000228335.1]
WARNING, no entry stored in dbm for [ENSG00000267632.1]
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WARNING, no entry stored in dbm for [ENSG00000228653.2]
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WARNING, no entry stored in dbm for [ENSG00000185986.12]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000232491.1]
WARNING, no entry stored in dbm for [ENSG00000224897.8]
WARNING, no entry stored in dbm for [ENSG00000281641.3]
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WARNING, no entry stored in dbm for [ENSG00000205181.7]
WARNING, no entry stored in dbm for [ENSG00000234618.1]
WARNING, no entry stored in dbm for [ENSG00000229648.1]
WARNING, no entry stored in dbm for [ENSG00000214203.4]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000213290.4]
WARNING, no entry stored in dbm for [ENSG00000254162.1]
WARNING, no entry stored in dbm for [ENSG00000229235.1]
WARNING, no entry stored in dbm for [ENSG00000231302.1]
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WARNING, no entry stored in dbm for [ENSG00000242993.1]
WARNING, no entry stored in dbm for [ENSG00000249359.3]
WARNING, no entry stored in dbm for [ENSG00000225404.2]
WARNING, no entry stored in dbm for [ENSG00000213935.3]
WARNING, no entry stored in dbm for [ENSG00000241129.3]
WARNING, no entry stored in dbm for [ENSG00000283646.2]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000224282.3]
WARNING, no entry stored in dbm for [ENSG00000252562.1]
WARNING, no entry stored in dbm for [ENSG00000200296.1]
WARNING, no entry stored in dbm for [ENSG00000242315.3]
WARNING, no entry stored in dbm for [ENSG00000241175.3]
WARNING, no entry stored in dbm for [ENSG00000258545.6]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000222257.1]
WARNING, no entry stored in dbm for [ENSG00000227101.2]
WARNING, no entry stored in dbm for [ENSG00000287095.1]
WARNING, no entry stored in dbm for [ENSG00000198555.7]
WARNING, no entry stored in dbm for [ENSG00000246067.8]
WARNING, no entry stored in dbm for [ENSG00000270021.1]
WARNING, no entry stored in dbm for [ENSG00000259001.3]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
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WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000259205.2]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000250928.1]
WARNING, no entry stored in dbm for [ENSG00000263317.1]
WARNING, no entry stored in dbm for [ENSG00000247572.8]
WARNING, no entry stored in dbm for [ENSG00000228434.1]
WARNING, no entry stored in dbm for [ENSG00000228546.2]
WARNING, no entry stored in dbm for [ENSG00000250778.1]
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WARNING, no entry stored in dbm for [ENSG00000261673.1]
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WARNING, no entry stored in dbm for [ENSG00000285591.1]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [ENSG00000251598.2]
WARNING, no entry stored in dbm for [ENSG00000258867.6]
WARNING, no entry stored in dbm for [ENSG00000243116.1]
WARNING, no entry stored in dbm for [ENSG00000285698.1]
WARNING, no entry stored in dbm for [ENSG00000273330.1]
WARNING, no entry stored in dbm for [ENSG00000269373.1]
WARNING, no entry stored in dbm for [ENSG00000239883.8]
WARNING, no entry stored in dbm for [ENSG00000230411.1]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000274993.1]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000214807.2]
WARNING, no entry stored in dbm for [ENSG00000214807.2]
WARNING, no entry stored in dbm for [ENSG00000260784.1]
WARNING, no entry stored in dbm for [ENSG00000275315.1]
WARNING, no entry stored in dbm for [ENSG00000223804.5]
WARNING, no entry stored in dbm for [ENSG00000257621.8]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000237422.2]
WARNING, no entry stored in dbm for [ENSG00000287291.1]
WARNING, no entry stored in dbm for [ENSG00000231933.7]
WARNING, no entry stored in dbm for [ENSG00000237840.6]
WARNING, no entry stored in dbm for [ENSG00000260492.3]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000288034.1]
WARNING, no entry stored in dbm for [ENSG00000229344.1]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000225885.7]
WARNING, no entry stored in dbm for [ENSG00000285961.1]
WARNING, no entry stored in dbm for [ENSG00000273906.1]
WARNING, no entry stored in dbm for [ENSG00000227769.7]
WARNING, no entry stored in dbm for [ENSG00000231532.6]
WARNING, no entry stored in dbm for [ENSG00000267519.6]
WARNING, no entry stored in dbm for [ENSG00000233325.3]
WARNING, no entry stored in dbm for [ENSG00000227499.1]
WARNING, no entry stored in dbm for [ENSG00000225783.8]
WARNING, no entry stored in dbm for [ENSG00000249669.10]
WARNING, no entry stored in dbm for [ENSG00000231312.7]
WARNING, no entry stored in dbm for [ENSG00000232677.9]
WARNING, no entry stored in dbm for [ENSG00000286295.1]
WARNING, no entry stored in dbm for [ENSG00000100068.14]
WARNING, no entry stored in dbm for [ENSG00000182648.13]
WARNING, no entry stored in dbm for [ENSG00000259945.1]
WARNING, no entry stored in dbm for [ENSG00000248391.6]
WARNING, no entry stored in dbm for [ENSG00000259439.2]
WARNING, no entry stored in dbm for [ENSG00000226320.6]
WARNING, no entry stored in dbm for [ENSG00000232679.2]
WARNING, no entry stored in dbm for [ENSG00000279579.3]
WARNING, no entry stored in dbm for [ENSG00000233973.7]
WARNING, no entry stored in dbm for [ENSG00000234807.7]
WARNING, no entry stored in dbm for [ENSG00000228205.1]
WARNING, no entry stored in dbm for [ENSG00000226903.2]
WARNING, no entry stored in dbm for [ENSG00000224243.2]
WARNING, no entry stored in dbm for [ENSG00000179219.5]
WARNING, no entry stored in dbm for [ENSG00000179406.8]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000245849.8]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000223935.3]
WARNING, no entry stored in dbm for [ENSG00000224699.9]
WARNING, no entry stored in dbm for [ENSG00000274471.2]
WARNING, no entry stored in dbm for [ENSG00000259869.2]
WARNING, no entry stored in dbm for [ENSG00000228412.9]
WARNING, no entry stored in dbm for [ENSG00000286505.1]
WARNING, no entry stored in dbm for [ENSG00000206192.7]
WARNING, no entry stored in dbm for [ENSG00000229043.3]
WARNING, no entry stored in dbm for [ENSG00000234336.7]
WARNING, no entry stored in dbm for [ENSG00000259945.1]
WARNING, no entry stored in dbm for [ENSG00000261305.2]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000214617.9]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000287214.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000225777.1]
WARNING, no entry stored in dbm for [ENSG00000228878.8]
WARNING, no entry stored in dbm for [ENSG00000222386.1]
WARNING, no entry stored in dbm for [ENSG00000238168.5]
WARNING, no entry stored in dbm for [ENSG00000235930.3]
WARNING, no entry stored in dbm for [ENSG00000259746.1]
WARNING, no entry stored in dbm for [ENSG00000279365.1]
WARNING, no entry stored in dbm for [ENSG00000224411.3]
WARNING, no entry stored in dbm for [ENSG00000223738.3]
WARNING, no entry stored in dbm for [ENSG00000283341.2]
WARNING, no entry stored in dbm for [ENSG00000204685.7]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000284669.1]
WARNING, no entry stored in dbm for [ENSG00000241388.5]
WARNING, no entry stored in dbm for [ENSG00000259722.2]
WARNING, no entry stored in dbm for [ENSG00000249338.1]
WARNING, no entry stored in dbm for [ENSG00000235290.1]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000196656.7]
WARNING, no entry stored in dbm for [ENSG00000196301.3]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000228309.7]
WARNING, no entry stored in dbm for [ENSG00000283050.2]
WARNING, no entry stored in dbm for [ENSG00000286068.1]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000231166.2]
WARNING, no entry stored in dbm for [ENSG00000277737.3]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000263070.1]
WARNING, no entry stored in dbm for [ENSG00000264315.1]
WARNING, no entry stored in dbm for [ENSG00000279943.1]
WARNING, no entry stored in dbm for [ENSG00000281357.3]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000244097.1]
WARNING, no entry stored in dbm for [ENSG00000285563.1]
WARNING, no entry stored in dbm for [ENSG00000260290.2]
WARNING, no entry stored in dbm for [ENSG00000205786.8]
WARNING, no entry stored in dbm for [ENSG00000248593.3]
WARNING, no entry stored in dbm for [ENSG00000236555.1]
WARNING, no entry stored in dbm for [ENSG00000259637.1]
WARNING, no entry stored in dbm for [ENSG00000241219.1]
WARNING, no entry stored in dbm for [ENSG00000218089.1]
WARNING, no entry stored in dbm for [ENSG00000215007.3]
WARNING, no entry stored in dbm for [ENSG00000271860.7]
WARNING, no entry stored in dbm for [ENSG00000263724.2]
WARNING, no entry stored in dbm for [ENSG00000180525.13]
WARNING, no entry stored in dbm for [ENSG00000227195.11]
WARNING, no entry stored in dbm for [ENSG00000239559.2]
WARNING, no entry stored in dbm for [ENSG00000251381.8]
WARNING, no entry stored in dbm for [ENSG00000205885.7]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000266975.1]
WARNING, no entry stored in dbm for [ENSG00000276077.4]
WARNING, no entry stored in dbm for [ENSG00000237984.3]
WARNING, no entry stored in dbm for [ENSG00000242193.11]
WARNING, no entry stored in dbm for [ENSG00000242193.11]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000270533.2]
WARNING, no entry stored in dbm for [ENSG00000260318.1]
WARNING, no entry stored in dbm for [ENSG00000284618.1]
WARNING, no entry stored in dbm for [ENSG00000242073.2]
WARNING, no entry stored in dbm for [ENSG00000214176.9]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [ENSG00000283033.1]
WARNING, no entry stored in dbm for [ENSG00000260192.3]
WARNING, no entry stored in dbm for [ENSG00000205334.2]
WARNING, no entry stored in dbm for [ENSG00000260711.2]
WARNING, no entry stored in dbm for [ENSG00000154608.14]
WARNING, no entry stored in dbm for [ENSG00000276832.2]
WARNING, no entry stored in dbm for [ENSG00000204790.9]
WARNING, no entry stored in dbm for [ENSG00000249007.1]
WARNING, no entry stored in dbm for [ENSG00000223773.7]
WARNING, no entry stored in dbm for [ENSG00000215039.7]
WARNING, no entry stored in dbm for [ENSG00000221845.4]
WARNING, no entry stored in dbm for [ENSG00000239224.3]
WARNING, no entry stored in dbm for [ENSG00000275090.1]
WARNING, no entry stored in dbm for [ENSG00000228544.1]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000262837.1]
WARNING, no entry stored in dbm for [ENSG00000285413.1]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000184208.12]
WARNING, no entry stored in dbm for [ENSG00000234936.1]
WARNING, no entry stored in dbm for [ENSG00000224750.6]
WARNING, no entry stored in dbm for [ENSG00000182352.8]
WARNING, no entry stored in dbm for [ENSG00000177410.13]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [ENSG00000220771.2]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000224023.10]
WARNING, no entry stored in dbm for [ENSG00000254560.6]
WARNING, no entry stored in dbm for [ENSG00000231955.1]
WARNING, no entry stored in dbm for [ENSG00000279356.1]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000257408.2]
WARNING, no entry stored in dbm for [ENSG00000271614.1]
WARNING, no entry stored in dbm for [ENSG00000261359.2]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000215105.4]
WARNING, no entry stored in dbm for [ENSG00000213653.4]
WARNING, no entry stored in dbm for [ENSG00000279495.1]
WARNING, no entry stored in dbm for [ENSG00000286216.1]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000255517.6]
WARNING, no entry stored in dbm for [ENSG00000246090.7]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000287917.1]
WARNING, no entry stored in dbm for [ENSG00000247416.4]
WARNING, no entry stored in dbm for [ENSG00000261610.1]
WARNING, no entry stored in dbm for [ENSG00000277878.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000215067.10]
WARNING, no entry stored in dbm for [ENSG00000250268.3]
WARNING, no entry stored in dbm for [ENSG00000254972.1]
WARNING, no entry stored in dbm for [ENSG00000235085.3]
WARNING, no entry stored in dbm for [ENSG00000249007.1]
WARNING, no entry stored in dbm for [ENSG00000249007.1]
WARNING, no entry stored in dbm for [ENSG00000230423.3]
WARNING, no entry stored in dbm for [ENSG00000287315.1]
WARNING, no entry stored in dbm for [ENSG00000284377.1]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000235020.5]
WARNING, no entry stored in dbm for [ENSG00000234352.9]
WARNING, no entry stored in dbm for [ENSG00000265194.1]
WARNING, no entry stored in dbm for [ENSG00000286109.1]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [ENSG00000213247.3]
WARNING, no entry stored in dbm for [ENSG00000287828.1]
WARNING, no entry stored in dbm for [ENSG00000259868.3]
WARNING, no entry stored in dbm for [ENSG00000234026.1]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000286757.2]
WARNING, no entry stored in dbm for [ENSG00000286594.1]
WARNING, no entry stored in dbm for [ENSG00000219682.4]
WARNING, no entry stored in dbm for [ENSG00000278276.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000279833.1]
WARNING, no entry stored in dbm for [ENSG00000229042.2]
WARNING, no entry stored in dbm for [ENSG00000279738.1]
WARNING, no entry stored in dbm for [ENSG00000284719.1]
WARNING, no entry stored in dbm for [ENSG00000279569.1]
WARNING, no entry stored in dbm for [ENSG00000232000.3]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000233586.1]
WARNING, no entry stored in dbm for [ENSG00000233586.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000242435.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000249592.6]
WARNING, no entry stored in dbm for [ENSG00000246596.7]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000287935.1]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000228205.1]
WARNING, no entry stored in dbm for [ENSG00000259925.1]
WARNING, no entry stored in dbm for [ENSG00000283345.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000285668.1]
WARNING, no entry stored in dbm for [ENSG00000219410.6]
WARNING, no entry stored in dbm for [ENSG00000225662.2]
WARNING, no entry stored in dbm for [ENSG00000280117.1]
WARNING, no entry stored in dbm for [ENSG00000287398.1]
WARNING, no entry stored in dbm for [ENSG00000264116.6]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000287331.1]
WARNING, no entry stored in dbm for [ENSG00000249706.1]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000279367.1]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000242759.8]
WARNING, no entry stored in dbm for [ENSG00000251249.2]
WARNING, no entry stored in dbm for [ENSG00000286358.1]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000250202.2]
WARNING, no entry stored in dbm for [ENSG00000284624.1]
WARNING, no entry stored in dbm for [ENSG00000232677.9]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000267458.1]
WARNING, no entry stored in dbm for [ENSG00000265943.1]
WARNING, no entry stored in dbm for [ENSG00000266379.6]
WARNING, no entry stored in dbm for [ENSG00000284636.1]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000215520.3]
WARNING, no entry stored in dbm for [ENSG00000283537.2]
WARNING, no entry stored in dbm for [ENSG00000284613.1]
WARNING, no entry stored in dbm for [ENSG00000254248.1]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000254398.1]
WARNING, no entry stored in dbm for [ENSG00000248932.6]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000285848.1]
WARNING, no entry stored in dbm for [ENSG00000242327.1]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000279433.1]
WARNING, no entry stored in dbm for [ENSG00000241556.1]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000270964.1]
WARNING, no entry stored in dbm for [ENSG00000254363.6]
WARNING, no entry stored in dbm for [ENSG00000286068.1]
WARNING, no entry stored in dbm for [ENSG00000225840.2]
WARNING, no entry stored in dbm for [ENSG00000100181.22]
WARNING, no entry stored in dbm for [ENSG00000265752.3]
WARNING, no entry stored in dbm for [ENSG00000257696.1]
WARNING, no entry stored in dbm for [ENSG00000260999.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000213303.3]
WARNING, no entry stored in dbm for [ENSG00000225790.2]
WARNING, no entry stored in dbm for [ENSG00000280257.1]
WARNING, no entry stored in dbm for [ENSG00000286739.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000233006.8]
WARNING, no entry stored in dbm for [ENSG00000268983.1]
WARNING, no entry stored in dbm for [ENSG00000232756.1]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000241278.1]
WARNING, no entry stored in dbm for [ENSG00000258944.1]
WARNING, no entry stored in dbm for [ENSG00000224322.2]
WARNING, no entry stored in dbm for [ENSG00000286478.1]
WARNING, no entry stored in dbm for [ENSG00000261312.1]
WARNING, no entry stored in dbm for [ENSG00000197476.3]
WARNING, no entry stored in dbm for [ENSG00000277739.1]
* STAR-Fusion complete. See output: /tmp/nxf.fUUJhm545Q/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)