Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/532b3b32e7c0384a5eda76503a2a3f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/58/39477d52a2eed0d9bae00888a91138/aih-tih-sc-150e73-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/532b3b32e7c0384a5eda76503a2a3f/.command.run
==> STAGING COMPLETE (3 inputs)

PAIRED_END_BAM_INPUT
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paired = 292311838
unpaired = 4638754
MERGED PAIRED END READS = 292311838
MATES PROCESSED = 589262430
TOTAL READS     = 296950592
DISTINCT READS  = 1.27252e+08
DISTINCT COUNTS = 1026
MAX COUNT       = 894080
COUNTS OF 1     = 6.26598e+07
MAX TERMS       = 100
OBSERVED COUNTS (894081)
1	62659789
2	30141605
3	15126915
4	7796355
5	4182840
6	2364843
7	1410635
8	891798
9	592960
10	413341
11	298323
12	223258
13	171304
14	134907
15	107910
16	87750
17	72598
18	61028
19	51348
20	44075
21	37587
22	33051
23	28785
24	25051
25	22342
26	20028
27	17612
28	15953
29	14253
30	13089
31	11629
32	10585
33	9629
34	8884
35	8159
36	7538
37	6925
38	6504
39	5861
40	5381
41	5026
42	4707
43	4318
44	4124
45	3850
46	3686
47	3335
48	3167
49	2966
50	2726
51	2730
52	2480
53	2484
54	2257
55	2194
56	2057
57	1929
58	1948
59	1720
60	1685
61	1567
62	1504
63	1507
64	1403
65	1289
66	1203
67	1216
68	1160
69	1113
70	1014
71	1019
72	981
73	977
74	892
75	825
76	818
77	804
78	722
79	717
80	657
81	634
82	687
83	635
84	588
85	593
86	563
87	562
88	495
89	495
90	511
91	498
92	511
93	462
94	466
95	450
96	412
97	407
98	355
99	362
100	366
101	352
102	350
103	324
104	335
105	314
106	336
107	307
108	309
109	298
110	290
111	260
112	267
113	268
114	271
115	235
116	211
117	229
118	212
119	207
120	230
121	188
122	200
123	209
124	179
125	185
126	170
127	208
128	184
129	148
130	167
131	174
132	150
133	169
134	161
135	150
136	141
137	147
138	164
139	139
140	136
141	117
142	123
143	133
144	146
145	122
146	115
147	118
148	118
149	112
150	133
151	96
152	126
153	110
154	93
155	106
156	101
157	81
158	89
159	76
160	115
161	85
162	104
163	103
164	78
165	82
166	89
167	78
168	69
169	83
170	79
171	88
172	65
173	70
174	75
175	72
176	71
177	62
178	72
179	73
180	66
181	78
182	64
183	56
184	67
185	66
186	61
187	53
188	59
189	65
190	52
191	62
192	64
193	58
194	65
195	46
196	53
197	46
198	39
199	46
200	44
201	56
202	63
203	58
204	50
205	43
206	38
207	36
208	40
209	38
210	44
211	44
212	42
213	36
214	47
215	40
216	38
217	56
218	31
219	49
220	37
221	22
222	37
223	23
224	35
225	30
226	32
227	40
228	38
229	25
230	37
231	39
232	28
233	32
234	29
235	29
236	37
237	28
238	39
239	26
240	26
241	30
242	22
243	27
244	31
245	25
246	25
247	16
248	24
249	25
250	32
251	27
252	22
253	29
254	29
255	24
256	31
257	22
258	32
259	24
260	20
261	27
262	20
263	18
264	32
265	26
266	25
267	25
268	16
269	24
270	20
271	16
272	15
273	11
274	19
275	20
276	27
277	21
278	21
279	19
280	19
281	23
282	18
283	13
284	11
285	14
286	16
287	14
288	7
289	20
290	20
291	12
292	13
293	20
294	12
295	18
296	14
297	24
298	9
299	16
300	13
301	14
302	16
303	12
304	8
305	15
306	13
307	13
308	9
309	10
310	12
311	12
312	12
313	11
314	15
315	11
316	9
317	9
318	10
319	7
320	11
321	17
322	13
323	10
324	9
325	15
326	17
327	12
328	13
329	12
330	9
331	12
332	12
333	16
334	10
335	11
336	5
337	9
338	8
339	9
340	18
341	10
342	9
343	14
344	9
345	8
346	12
347	10
348	13
349	8
350	5
351	9
352	10
353	11
354	18
355	9
356	5
357	8
358	6
359	9
360	3
361	8
362	19
363	14
364	2
365	12
366	7
367	9
368	7
369	17
370	4
371	9
372	11
373	10
374	3
375	9
376	10
377	13
378	5
379	10
380	3
381	7
382	6
383	9
384	7
385	9
386	6
387	17
388	7
389	5
390	3
391	10
392	9
393	11
394	5
395	5
396	14
397	10
398	8
399	7
400	6
401	16
402	6
403	9
404	7
405	2
406	4
407	9
408	7
409	2
410	10
411	8
412	6
413	5
414	14
415	5
416	9
417	6
418	5
419	6
420	2
421	3
422	5
423	6
424	5
425	5
426	6
427	4
428	6
429	6
430	8
431	7
432	2
433	5
434	5
435	7
436	3
437	4
438	8
439	4
440	6
441	8
442	7
443	9
444	6
445	6
446	2
447	1
448	7
449	4
450	4
451	4
452	5
453	5
454	2
455	3
456	6
457	6
458	5
459	5
460	3
461	7
462	7
463	6
464	5
465	4
466	2
467	4
468	7
469	2
470	5
472	6
473	5
474	6
475	3
476	2
477	6
478	6
479	7
480	2
481	1
482	3
483	5
484	1
485	5
486	2
487	5
488	4
489	3
490	4
491	3
492	4
493	1
494	6
495	3
496	6
497	4
498	7
499	2
500	3
501	4
502	4
504	5
505	7
506	1
507	6
508	6
509	2
510	4
511	2
512	6
513	2
514	8
516	3
517	4
518	1
519	4
521	3
522	2
523	1
525	2
526	3
527	3
528	2
529	1
530	4
531	3
532	1
533	8
534	2
535	2
536	4
537	2
538	4
539	2
540	1
541	5
543	4
545	5
546	3
547	2
548	5
549	3
550	3
551	1
554	3
555	1
556	2
557	4
558	2
559	2
560	2
561	3
562	3
563	5
564	3
565	4
566	2
567	4
568	1
569	3
570	3
572	2
574	1
575	3
576	3
577	1
578	3
579	2
580	3
581	1
583	3
584	2
585	2
586	2
587	4
588	1
589	1
590	3
591	1
592	2
593	1
594	2
595	3
596	2
597	2
598	2
599	5
600	1
601	3
602	1
603	3
604	1
605	4
606	1
608	2
609	3
610	2
611	1
612	1
613	3
614	5
615	2
616	3
617	1
619	3
620	2
621	2
622	2
623	4
626	1
627	3
628	2
629	3
630	1
631	2
632	3
633	3
635	2
636	1
637	3
638	4
639	3
640	5
641	3
642	2
646	2
647	2
648	3
649	1
650	2
651	2
653	1
654	1
655	1
656	1
658	1
661	1
662	2
663	1
664	1
665	5
666	1
667	1
668	2
670	3
671	3
672	1
673	1
674	2
675	2
677	1
678	3
679	4
680	1
682	2
683	6
684	3
685	2
686	1
689	1
690	3
691	2
692	3
694	1
695	1
696	1
697	2
698	1
699	1
700	1
701	2
702	2
703	1
707	2
708	3
709	2
711	2
712	1
713	1
714	2
717	3
718	3
720	1
721	1
722	1
723	1
724	1
727	1
728	4
729	2
730	1
731	2
732	1
734	1
735	1
737	1
739	1
740	2
743	1
744	2
746	1
750	4
751	2
752	2
753	1
754	2
757	1
758	5
759	1
760	1
761	1
762	3
763	1
765	2
766	1
768	2
769	1
770	2
772	3
773	2
776	1
777	1
779	2
780	1
781	3
782	1
783	2
787	2
788	1
791	3
793	2
798	1
799	2
800	1
801	1
803	2
806	2
807	2
810	1
813	1
817	2
818	1
819	3
821	2
823	1
826	1
828	1
830	1
831	3
832	1
834	2
836	1
837	1
838	1
840	1
841	1
842	3
843	1
847	1
848	2
849	3
854	1
855	2
857	1
858	1
859	2
861	2
864	2
866	1
867	2
868	1
872	2
875	1
877	3
878	1
879	1
880	1
882	2
883	1
890	2
891	2
892	1
893	1
894	1
897	1
899	1
903	1
909	1
910	1
912	1
913	1
914	1
916	1
922	1
923	1
926	3
927	1
928	1
932	1
935	2
939	1
941	1
944	1
946	1
947	1
949	1
952	1
954	1
956	1
957	1
958	1
962	1
964	2
965	1
966	1
968	4
969	1
975	1
981	2
982	2
983	2
984	2
985	1
987	1
989	1
991	1
992	1
993	3
994	1
995	1
998	1
999	1
1001	1
1006	1
1010	1
1013	3
1014	1
1017	1
1020	1
1024	1
1025	1
1026	2
1029	1
1032	1
1035	1
1036	2
1038	1
1039	2
1046	1
1048	2
1050	1
1052	1
1054	2
1058	2
1059	1
1064	1
1066	1
1074	1
1082	1
1084	1
1089	1
1092	1
1099	1
1102	1
1105	1
1106	2
1110	1
1112	1
1113	1
1118	1
1121	1
1127	1
1136	1
1138	1
1139	1
1145	1
1148	1
1149	1
1150	1
1160	1
1161	1
1165	1
1169	1
1172	1
1183	1
1189	2
1194	1
1196	1
1199	1
1200	1
1210	1
1222	1
1231	1
1233	1
1234	1
1254	1
1256	1
1262	1
1266	1
1271	1
1275	1
1283	1
1289	1
1292	2
1293	1
1296	1
1302	2
1304	1
1305	2
1307	1
1310	1
1313	1
1314	1
1319	2
1325	1
1330	1
1341	2
1346	1
1350	1
1351	1
1352	1
1355	1
1363	1
1371	1
1381	1
1387	1
1389	1
1395	1
1396	1
1404	1
1408	1
1416	1
1421	1
1425	1
1434	2
1435	1
1436	1
1447	1
1449	1
1467	1
1469	1
1474	1
1485	1
1494	1
1495	1
1504	1
1509	1
1515	1
1519	1
1524	1
1541	1
1580	1
1588	1
1590	1
1591	1
1596	1
1603	1
1701	1
1703	1
1705	2
1708	1
1721	1
1730	1
1734	1
1736	1
1748	1
1763	2
1792	1
1794	1
1833	1
1836	1
1869	2
1882	1
1889	1
1893	1
1908	1
1939	1
1942	1
1944	1
1953	1
2015	1
2022	1
2031	1
2032	1
2071	1
2083	1
2088	1
2109	1
2116	1
2142	1
2162	1
2197	1
2199	1
2287	1
2289	1
2326	1
2335	1
2353	1
2400	1
2429	1
2476	1
2544	1
2572	1
2646	1
2736	1
2757	1
2758	1
2760	1
2841	1
2928	1
3068	1
3138	1
3146	1
3225	1
3276	1
3281	1
3430	1
3568	1
4267	1
4303	1
4444	1
9681	1
18128	1
18684	1
67077	1
894080	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
..__.._._._._...._._._..._........__.._............_.................._.
....__..........._........._......._.._._...._.._..__.
[COMPUTING CONFIDENCE INTERVALS]
[WRITING OUTPUT]