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Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0021/A23YTGFLT4/nfcore_rnafusion__d2190e45--20260603-105009/bclconvert/L006/Reports/Demultiplex_Stats.csv
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10.8 KB
Workflow Run
dev_rna_exp0021-d2190e45
Published
Jun 03, 2026 11:23 AM

Content

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Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
6 aih-tih-sc-d666f1-R1_A23YTGFLT4_1 TAACTTGGTC-GTCGTGAATC 33569854 32943484 626370 0 0.0085 0.9813 0.0187 0.0000
6 aih-tih-sc-3282fd-R1_A23YTGFLT4_1 ATAAGCGGAG-CTGTTCTACG 30771501 29525129 1246372 0 0.0078 0.9595 0.0405 0.0000
6 aih-tih-sc-67e6e5-R1_A23YTGFLT4_1 AGTAGTGTTG-AACACCTCTT 46683923 45785745 898178 0 0.0118 0.9808 0.0192 0.0000
6 aih-tih-sc-3377ac-R1_A23YTGFLT4_1 ATGTTGCCAC-TAGAAGCCAT 44434029 43605885 828144 0 0.0112 0.9814 0.0186 0.0000
6 aih-tih-sc-5519ab-R1_A23YTGFLT4_1 CAGCAGGTCA-CACTTAGGTA 43730342 43064533 665809 0 0.0111 0.9848 0.0152 0.0000
6 aih-tih-sc-966ec5-R1_A23YTGFLT4_1 TCTAGCTGCG-ATAGGTAAGG 43552454 42729900 822554 0 0.0110 0.9811 0.0189 0.0000
6 aih-tih-sc-776623-R1_A23YTGFLT4_1 AGATTAGCGT-CGCCTTATAT 43708152 42472616 1235536 0 0.0111 0.9717 0.0283 0.0000
6 aih-tih-sc-01eb49-R1_A23YTGFLT4_1 AGGTAACAAC-GCACGATGCT 42535328 41798655 736673 0 0.0108 0.9827 0.0173 0.0000
6 aih-tih-sc-8c7069-R1_A23YTGFLT4_1 CGCACTTCGT-AATATGCCAG 30483141 29953211 529930 0 0.0077 0.9826 0.0174 0.0000
6 aih-tih-sc-a8a787-R1_A23YTGFLT4_1 CTTGCTATTC-TAGAGTCACG 68144262 66810998 1333264 0 0.0172 0.9804 0.0196 0.0000
6 aih-tih-sc-fba77b-R1_A23YTGFLT4_1 TCTCACCAGG-TTAACAGGTC 6768856 6611856 157000 0 0.0017 0.9768 0.0232 0.0000
6 aih-tih-sc-a9fe91-R1_A23YTGFLT4_1 TTCCTCACGT-ACATGAGCCA 65884635 64717249 1167386 0 0.0167 0.9823 0.0177 0.0000
6 aih-tih-sc-9b89b4-R1_A23YTGFLT4_1 TCGAACACGA-GCGAGGTTCT 41459454 40707734 751720 0 0.0105 0.9819 0.0181 0.0000
6 aih-tih-sc-13d441-R1_A23YTGFLT4_1 TCCAACTGAA-TGTCCGTAGG 32402897 31696533 706364 0 0.0082 0.9782 0.0218 0.0000
6 aih-tih-sc-7f9674-R1_A23YTGFLT4_1 GAACCGCATT-CATTATGCCT 50099513 49214469 885044 0 0.0127 0.9823 0.0177 0.0000
6 aih-tih-sc-da06ce-R1_A23YTGFLT4_1 ACAACAGGCT-TCCACTGTTG 48256654 47457595 799059 0 0.0122 0.9834 0.0166 0.0000
6 aih-tih-sc-ecc0bc-R1_A23YTGFLT4_1 TTACGCGCAT-CTTAACGACA 30915100 30390908 524192 0 0.0078 0.9830 0.0170 0.0000
6 aih-tih-sc-6c4b48-R1_A23YTGFLT4_1 TTCTCTTAGC-TCCTCGAGCT 58206439 57174952 1031487 0 0.0147 0.9823 0.0177 0.0000
6 aih-tih-sc-31d31f-R1_A23YTGFLT4_1 TCGCGACACT-CGAGTAATGT 24484152 24035240 448912 0 0.0062 0.9817 0.0183 0.0000
6 aih-tih-sc-816ec7-R1_A23YTGFLT4_1 TGGAGATCGA-CAGCGGTATG 47334305 45916084 1418221 0 0.0120 0.9700 0.0300 0.0000
6 aih-tih-sc-fe8311-R1_A23YTGFLT4_1 CCAGACCGAT-GCTACTTGCA 49618194 48567600 1050594 0 0.0126 0.9788 0.0212 0.0000
6 aih-tih-sc-f834a3-R1_A23YTGFLT4_1 CCACAGCCTT-GCTATTGAAG 29694040 29106036 588004 0 0.0075 0.9802 0.0198 0.0000
6 aih-tih-sc-0754d2-R1_A23YTGFLT4_1 ACCGAATAGA-TCAGCATCCG 3803588 3720690 82898 0 0.0010 0.9782 0.0218 0.0000
6 aih-tih-sc-a51633-R1_A23YTGFLT4_1 CGGACGATTC-TAGGTGGTGG 63993720 62947424 1046296 0 0.0162 0.9837 0.0163 0.0000
6 aih-tih-sc-64fc89-R1_A23YTGFLT4_1 TTACTTCGTG-AAGATCGGAT 43663074 42904908 758166 0 0.0110 0.9826 0.0174 0.0000
6 aih-tih-sc-ffabe0-R1_A23YTGFLT4_1 ATTCGGCTTA-TTAACGTCCG 38466359 37825337 641022 0 0.0097 0.9833 0.0167 0.0000
6 aih-tih-sc-242a7d-R1_A23YTGFLT4_1 CGCGGTATCT-ATTACCGATC 31960108 31434862 525246 0 0.0081 0.9836 0.0164 0.0000
6 aih-tih-sc-f0dbdf-R1_A23YTGFLT4_1 TATCCGCGTC-GTTGCATCGT 45064970 44194610 870360 0 0.0114 0.9807 0.0193 0.0000
6 aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1 AGGATGTCCA-ACTGGACGTT 43356131 42529579 826552 0 0.0110 0.9809 0.0191 0.0000
6 aih-tih-sc-318819-R1_A23YTGFLT4_1 GCCAGCTATC-TTGTTCGTGT 32355215 31746218 608997 0 0.0082 0.9812 0.0188 0.0000
6 aih-tih-sc-e08fa3-R1_A23YTGFLT4_1 CTTACGAACT-ACGGACTGAG 51494903 50546495 948408 0 0.0130 0.9816 0.0184 0.0000
6 NTC_0001_0001_A23YTGFLT4_1 CAAGACTCAA-CACCGTCATA 11433 11197 236 0 0.0000 0.9794 0.0206 0.0000
6 aih-tih-sc-b8457f-R1_A23YTGFLT4_1 TCGACGGCAA-GTAGTTGTGT 52617307 51691959 925348 0 0.0133 0.9824 0.0176 0.0000
6 aih-tih-sc-6cc13c-R1_A23YTGFLT4_1 TCAGTTCGAT-CTGAGTCCTT 51098919 50174257 924662 0 0.0129 0.9819 0.0181 0.0000
6 aih-tih-sc-2b9bfa-R1_A23YTGFLT4_1 CTAACCTCAA-TCACAGTTGC 43657856 42770139 887717 0 0.0110 0.9797 0.0203 0.0000
6 aih-tih-sc-c400f1-R1_A23YTGFLT4_1 GACCTACTAT-ATTGTAAGCG 47054242 46187452 866790 0 0.0119 0.9816 0.0184 0.0000
6 aih-tih-sc-2e5fe9-R1_A23YTGFLT4_1 ACGAGACGTC-CGGTCTCTCT 51815835 50816879 998956 0 0.0131 0.9807 0.0193 0.0000
6 aih-tih-sc-fa55c3-R1_A23YTGFLT4_1 TATGGCAAGC-AACAGCAATG 37912531 37212079 700452 0 0.0096 0.9815 0.0185 0.0000
6 aih-tih-sc-598a93-R1_A23YTGFLT4_1 ACTCCGAAGC-TCCGTGTTGC 7759334 7621867 137467 0 0.0020 0.9823 0.0177 0.0000
6 aih-tih-sc-538ae3-R1_A23YTGFLT4_1 AATCTGCAGT-TGCGAAGTGA 51302251 50499024 803227 0 0.0130 0.9843 0.0157 0.0000
6 aih-tih-sc-b6a2e8-R1_A23YTGFLT4_1 AGTTCAGGCG-CACAGCTATT 54315045 53317207 997838 0 0.0137 0.9816 0.0184 0.0000
6 aih-tih-sc-45523c-R1_A23YTGFLT4_1 CGCCAAGGTA-GATAGTGTTC 30756646 30161359 595287 0 0.0078 0.9806 0.0194 0.0000
6 aih-tih-sc-d5fda9-R1_A23YTGFLT4_1 CCTGACATCT-TAGCTACCAG 3677554 3573404 104150 0 0.0009 0.9717 0.0283 0.0000
6 aih-tih-sc-184b05-R1_A23YTGFLT4_1 CGAGCGTAGT-TGCTCACGCA 64432179 63362013 1070166 0 0.0163 0.9834 0.0166 0.0000
6 aih-tih-sc-e1cae1-R1_A23YTGFLT4_1 CTGGATTACT-AAGTGTGCTA 22308566 21969665 338901 0 0.0056 0.9848 0.0152 0.0000
6 aih-tih-sc-8e3550-R1_A23YTGFLT4_1 AGCAATTCAC-TCATCGTCTG 19723001 19380476 342525 0 0.0050 0.9826 0.0174 0.0000
6 aih-tih-sc-f2fa3a-R1_A23YTGFLT4_1 ATATTCTCGG-AGATGCTCCG 40047938 39212792 835146 0 0.0101 0.9791 0.0209 0.0000
6 aih-tih-sc-24ecfe-R1_A23YTGFLT4_1 GACTCATCCA-GAACCAAGCG 4278099 4185357 92742 0 0.0011 0.9783 0.0217 0.0000
6 aih-tih-sc-5ceb9a-R1_A23YTGFLT4_1 CATAAGCGAC-CCTCTTCAAG 36106268 35382063 724205 0 0.0091 0.9799 0.0201 0.0000
6 aih-tih-sc-c493d4-R1_A23YTGFLT4_1 CCTAAGCTGA-CGTCGCATCT 30525766 29894231 631535 0 0.0077 0.9793 0.0207 0.0000
6 aih-tih-sc-89f3a3-R1_A23YTGFLT4_1 CGATGTCTTG-CCGAACGTTC 55668001 54672466 995535 0 0.0141 0.9821 0.0179 0.0000
6 aih-tih-sc-3b436b-R1_A23YTGFLT4_1 GAGATGAGAG-GAATGGCGTT 16352419 15905913 446506 0 0.0041 0.9727 0.0273 0.0000
6 aih-tih-sc-92d360-R1_A23YTGFLT4_1 TCACCATAAG-AAGTTCAGGA 30610631 30036672 573959 0 0.0077 0.9812 0.0188 0.0000
6 aih-tih-sc-28eb14-R1_A23YTGFLT4_1 ACTTCCGGCA-GACCAATTGT 48377720 47609575 768145 0 0.0122 0.9841 0.0159 0.0000
6 aih-tih-sc-ffd2af-R1_A23YTGFLT4_1 AAGCGCTTAG-TGTCTGTGAC 27754994 27100507 654487 0 0.0070 0.9764 0.0236 0.0000
6 aih-tih-sc-790e56-R1_A23YTGFLT4_1 AACAACACAG-GAACATTGGC 21452522 21030125 422397 0 0.0054 0.9803 0.0197 0.0000
6 aih-tih-sc-d1f1a3-R1_A23YTGFLT4_1 AGACTAGATG-CGTAACACTA 45563964 44631968 931996 0 0.0115 0.9795 0.0205 0.0000
6 aih-tih-sc-a558c6-R1_A23YTGFLT4_1 CCTCTATAGA-GTACTTCCAA 18760753 18322995 437758 0 0.0047 0.9767 0.0233 0.0000
6 aih-tih-sc-b6fd19-R1_A23YTGFLT4_1 TACGCTACTT-TTAGCGTCTT 52638703 51640181 998522 0 0.0133 0.9810 0.0190 0.0000
6 aih-tih-sc-885658-R1_A23YTGFLT4_1 CGCACTGGTA-TTGACCGTCT 34510789 33950098 560691 0 0.0087 0.9838 0.0162 0.0000
6 aih-tih-sc-49909d-R1_A23YTGFLT4_1 AACTCTCTAC-ACGGCTTCTC 33819978 32992345 827633 0 0.0086 0.9755 0.0245 0.0000
6 aih-tih-sc-96d0f6-R1_A23YTGFLT4_1 GCCACCTAGT-TGCGATGTAT 44032701 42964903 1067798 0 0.0111 0.9757 0.0243 0.0000
6 aih-tih-sc-7fa0fb-R1_A23YTGFLT4_1 CTCCGCCATA-GCGTTCAGCA 23704474 23247842 456632 0 0.0060 0.9807 0.0193 0.0000
6 FFPE_V4_0002_RNA_0002_A23YTGFLT4_1 TGACACGATT-GCCTAGGAAG 36345130 35631998 713132 0 0.0092 0.9804 0.0196 0.0000
6 aih-tih-sc-64cd51-R1_A23YTGFLT4_1 CAACTGCGCA-AGTGTATCCG 39518458 38604613 913845 0 0.0100 0.9769 0.0231 0.0000
6 aih-tih-sc-cece97-R1_A23YTGFLT4_1 GCAATCTGCT-ACGAACCAAG 43756162 42905559 850603 0 0.0111 0.9806 0.0194 0.0000
6 aih-tih-sc-c35cc3-R1_A23YTGFLT4_1 CTCTATTGAG-CACGCAAGTC 31677919 30566450 1111469 0 0.0080 0.9649 0.0351 0.0000
6 aih-tih-sc-f6bb6f-R1_A23YTGFLT4_1 CACTTACGGC-GCTGGAGAAG 38355390 37625947 729443 0 0.0097 0.9810 0.0190 0.0000
6 aih-tih-sc-f27606-R1_A23YTGFLT4_1 TCAGCATCTA-CCAGTGTACG 37083642 36384374 699268 0 0.0094 0.9811 0.0189 0.0000
6 aih-tih-sc-3abdf4-R1_A23YTGFLT4_1 GTTGCATCAA-GTTGATGCGA 30441981 29920405 521576 0 0.0077 0.9829 0.0171 0.0000
6 aih-tih-sc-1274d4-R1_A23YTGFLT4_1 ATGACAGCAC-CGCTTGTTAT 32840216 32083745 756471 0 0.0083 0.9770 0.0230 0.0000
6 aih-tih-sc-573e21-R1_A23YTGFLT4_1 TAGCGACGGA-GTAACGTTCA 40619661 39685955 933706 0 0.0103 0.9770 0.0230 0.0000
6 aih-tih-sc-69be7e-R1_A23YTGFLT4_1 GTATGCCACA-CCGAGTCTTC 39132959 38404733 728226 0 0.0099 0.9814 0.0186 0.0000
6 aih-tih-sc-56cab8-R1_A23YTGFLT4_1 AGTATCCGAT-TATTGCGCTA 44747073 43530608 1216465 0 0.0113 0.9728 0.0272 0.0000
6 aih-tih-sc-a97ce1-R1_A23YTGFLT4_1 AACGAAGATC-TGTGGTCTAA 27359149 26777195 581954 0 0.0069 0.9787 0.0213 0.0000
6 aih-tih-sc-d963a2-R1_A23YTGFLT4_1 CCTCCTGTGA-CACGTCTACG 51088632 49735804 1352828 0 0.0129 0.9735 0.0265 0.0000
6 aih-tih-sc-f8efb2-R1_A23YTGFLT4_1 TAGGCGAATG-AGTCCAGTGA 42437310 41684123 753187 0 0.0107 0.9823 0.0177 0.0000
6 aih-tih-sc-656590-R1_A23YTGFLT4_1 AGTAAGGAGA-ATGCTTGGTC 34090736 33506895 583841 0 0.0086 0.9829 0.0171 0.0000
6 aih-tih-sc-9703f5-R1_A23YTGFLT4_1 CCGAACAGAG-TGATACTCGC 21303565 20723794 579771 0 0.0054 0.9728 0.0272 0.0000
6 aih-tih-sc-150e73-R1_A23YTGFLT4_1 AGAACTAACG-TTATCGAGAG 48296209 47409755 886454 0 0.0122 0.9816 0.0184 0.0000
6 aih-tih-sc-eecf9f-R1_A23YTGFLT4_1 GAGCAGCTTG-TGCCAGTATT 71984342 70276631 1707711 0 0.0182 0.9763 0.0237 0.0000
6 aih-tih-sc-714733-R1_A23YTGFLT4_1 CCGATAGTAG-GAGTTGCATA 43286323 42022162 1264161 0 0.0110 0.9708 0.0292 0.0000
6 aih-tih-sc-5b8b4a-R1_A23YTGFLT4_1 GTGTCTACAG-ACACTAGCAT 43037479 42270456 767023 0 0.0109 0.9822 0.0178 0.0000
6 aih-tih-sc-3270ab-R1_A23YTGFLT4_1 GTACAGACCG-GTTCTAATGG 56667560 55517540 1150020 0 0.0143 0.9797 0.0203 0.0000
6 aih-tih-sc-9e2647-R1_A23YTGFLT4_1 GCCAACAGAC-CGTTCACGTT 41266358 40462126 804232 0 0.0104 0.9805 0.0195 0.0000
6 aih-tih-sc-992d78-R1_A23YTGFLT4_1 CCTCGTTGGA-GACTGCGTTA 34200337 33448785 751552 0 0.0087 0.9780 0.0220 0.0000
6 aih-tih-sc-f7ac14-R1_A23YTGFLT4_1 AATAGGTAGG-TGGCTTATGG 37056505 36425827 630678 0 0.0094 0.9830 0.0170 0.0000
6 aih-tih-sc-377071-R1_A23YTGFLT4_1 TATGCGTAGC-TCAGAGGCAC 41028115 40310192 717923 0 0.0104 0.9825 0.0175 0.0000
6 aih-tih-sc-4bcd26-R1_A23YTGFLT4_1 CCAGTCGTCA-CGCTAGGCTA 24477208 24017928 459280 0 0.0062 0.9812 0.0188 0.0000
6 aih-tih-sc-f26674-R1_A23YTGFLT4_1 AGAAGACCTA-AACCGTAACA 53000468 51678018 1322450 0 0.0134 0.9750 0.0250 0.0000
6 aih-tih-sc-ec2fd6-R1_A23YTGFLT4_1 CCGTGAGTTC-CTTGGTATGA 35641290 34989781 651509 0 0.0090 0.9817 0.0183 0.0000
6 aih-tih-sc-01c779-R1_A23YTGFLT4_1 TCAATTCCGA-TGTAGATCCG 34110514 33561055 549459 0 0.0086 0.9839 0.0161 0.0000
6 aih-tih-sc-bbc28d-R1_A23YTGFLT4_1 CGGAACACAA-AACTCTACCG 26294764 25689984 604780 0 0.0067 0.9770 0.0230 0.0000
6 aih-tih-sc-607ec3-R1_A23YTGFLT4_1 CTATAACGGA-CGTGACATTC 23414453 22945347 469106 0 0.0059 0.9800 0.0200 0.0000
6 aih-tih-sc-b567d0-R1_A23YTGFLT4_1 AGATGTAAGG-CTGTACCAGG 29045694 28547383 498311 0 0.0073 0.9828 0.0172 0.0000
6 FFPE_HD789_01_RNA_13_A23YTGFLT4_1 ATGCTTACTG-ACTGGTTCCG 57356792 56316881 1039911 0 0.0145 0.9819 0.0181 0.0000
6 Undetermined 291458533 291458533 0 0 0.0738 1.0000 0.0000 0.0000
98 rows