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aih-tih-sc-5519ab-R1_A23YTGFLT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0021/A23YTGFLT4/nfcore_rnafusion__d2190e45--20260603-105009/fusioninspector/aih-tih-sc-5519ab-R1_A23YTGFLT4_1.FusionInspector.fusions.abridged.tsv
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Workflow Run
dev_rna_exp0021-d2190e45
Published
Jun 03, 2026 3:34 PM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
PCDHGA4--PCDHGB6 453 0 90.60 0.00 PCDHGA4^ENSG00000262576.3 3582 chr5:141357621:+ PCDHGB6^ENSG00000253305.2 12293 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 69 454.00 6.49 GT 1.9329 AG 1.3383 0.3055 1287 0
PCDHGA4--PCDHGB6 6 0 6.00 0.00 PCDHGA4^ENSG00000262576.3 3582 chr5:141357621:+ PCDHGB6^ENSG00000253305.2 7939 chr5:141409268:+ INCL_NON_REF_SPLICE YES 0 402 7.00 0.02 GT 1.9329 AG 1.7819 0.0202 951 0
PCDHGA4--PCDHGB7 453 0 90.60 0.00 PCDHGA4^ENSG00000262576.3 3582 chr5:141357621:+ PCDHGB7^ENSG00000254122.3 10477 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 16 454.00 26.71 GT 1.9329 AG 1.3383 0.3055 1774 0
PCDHGA4--PCDHGC3 453 0 90.60 0.00 PCDHGA4^ENSG00000262576.3 3582 chr5:141357621:+ PCDHGC3^ENSG00000240184.7 10541 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 178 454.00 2.54 GT 1.9329 AG 1.3383 0.3055 1676 0
PCDHGA4--PCDHGC4 453 0 90.60 0.00 PCDHGA4^ENSG00000262576.3 3582 chr5:141357621:+ PCDHGC4^ENSG00000242419.5 10485 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 5 454.00 75.67 GT 1.9329 AG 1.3383 0.3055 1193 0
PCDHGA4--PCDHGC5 453 0 90.60 0.00 PCDHGA4^ENSG00000262576.3 3582 chr5:141357621:+ PCDHGC5^ENSG00000240764.4 10541 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 108 454.00 4.17 GT 1.9329 AG 1.3383 0.3055 1880 0
LINC00381--NKAIN2 447 0 432.97 0.00 LINC00381^ENSG00000226240.2 2708 chr13:74426418:+ NKAIN2^ENSG00000188580.15 13692 chr6:124355267:+ ONLY_REF_SPLICE YES 0 12 448.00 34.46 GT 1.9656 AG 1.8892 1.4601 3642 0
AC005993.1--RGS6 266 2 266.00 1.98 AC005993.1^ENSG00000266869.2 7910 chr14:71916030:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 0 38 269.00 6.90 GT 1.6402 AG 1.9086 0.9037 3057 0
AC005993.1--RGS6 165 0 165.00 0.00 AC005993.1^ENSG00000266869.2 1131 chr14:71848736:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 7 38 20.75 4.26 GT 1.9656 AG 1.9086 0.5564 4013 0
AC005993.1--RGS6 159 0 159.00 0.00 AC005993.1^ENSG00000266869.2 4841 chr14:71908434:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 3 38 40.00 4.10 GT 1.8892 AG 1.9086 0.5362 1167 0
AC005993.1--RGS6 31 0 31.00 0.00 AC005993.1^ENSG00000266869.2 4837 chr14:71908430:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 3 38 8.00 0.82 GT 1.8892 AG 1.9086 0.1045 1167 0
AC005993.1--RGS6 7 0 7.00 0.00 AC005993.1^ENSG00000266869.2 4841 chr14:71908434:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 3 85 2.00 0.09 GT 1.8892 AG 1.8323 0.0236 142 0
AC005993.1--RGS6 3 2 3.00 0.02 AC005993.1^ENSG00000266869.2 9007 chr14:71919246:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 0 38 6.00 0.15 GT 1.9329 AG 1.9086 0.0102 2463 0
AC005993.1--RGS6 3 0 3.00 0.00 AC005993.1^ENSG00000266869.2 3571 chr14:71869984:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 4 38 0.80 0.10 GT 1.8062 AG 1.9086 0.0101 1819 0
AC005993.1--RGS6 1 0 1.00 0.00 AC005993.1^ENSG00000266869.2 6755 chr14:71910652:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 2 38 0.67 0.05 GT 1.7465 AG 1.9086 0.0034 2118 0
AC005993.1--RGS6 1 0 1.00 0.00 AC005993.1^ENSG00000266869.2 7910 chr14:71916030:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 0 85 2.00 0.02 GT 1.6402 AG 1.8323 0.0034 2045 0
AC005993.1--RGS6 1 0 1.00 0.00 AC005993.1^ENSG00000266869.2 1131 chr14:71848736:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 7 85 0.25 0.02 GT 1.9656 AG 1.8323 0.0034 3754 0
C12orf56--NKAIN2 207 0 10.57 0.00 C12orf56^ENSG00000185306.13 8409 chr12:64293281:- NKAIN2^ENSG00000188580.15 25071 chr6:124355267:+ ONLY_REF_SPLICE YES 30 12 6.71 16.00 GT 1.9656 AG 1.8892 0.0356 4206 0
GUCY1B2--NKAIN2 196 0 24.46 0.00 GUCY1B2^ENSG00000123201.14 1112 chr13:51080751:- NKAIN2^ENSG00000188580.15 28131 chr6:124355267:+ ONLY_REF_SPLICE YES 1 12 98.50 15.15 GT 1.9656 AG 1.8892 0.0825 3725 0
GUCY1B2--NKAIN2 14 0 14.00 0.00 GUCY1B2^ENSG00000123201.14 1156 chr13:51080707:- NKAIN2^ENSG00000188580.15 28131 chr6:124355267:+ ONLY_REF_SPLICE YES 1 12 7.50 1.15 GT 1.7465 AG 1.8892 0.0472 3713 0
PCDHGB2--PCDHGA10 135 0 16.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 93 136.00 1.45 GT 1.7819 AG 1.3383 0.0569 1890 0
PCDHGB2--PCDHGA11 135 0 16.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 25 136.00 5.23 GT 1.7819 AG 1.3383 0.0569 1018 0
PCDHGB2--PCDHGA12 135 0 16.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 20 136.00 6.48 GT 1.7819 AG 1.3383 0.0569 1413 0
PCDHGB2--PCDHGA8 135 0 16.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 17 136.00 7.56 GT 1.7819 AG 1.3383 0.0569 1419 0
PCDHGB2--PCDHGA9 135 0 16.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 30 136.00 4.39 GT 1.7819 AG 1.3383 0.0569 1493 0
PCDHGB2--PCDHGC3 135 0 16.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 178 136.00 0.76 GT 1.7819 AG 1.3383 0.0569 1210 0
PCDHGB2--PCDHGC4 135 0 16.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 5 136.00 22.67 GT 1.7819 AG 1.3383 0.0569 1585 0
PCDHGB2--PCDHGC5 135 0 16.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 108 136.00 1.25 GT 1.7819 AG 1.3383 0.0569 1206 0
PCDHA11--PCDHAC1 95 0 47.50 0.00 PCDHA11^ENSG00000249158.7 4312 chr5:140871494:+ PCDHAC1^ENSG00000248383.5 12566 chr5:140978949:+ INCL_NON_REF_SPLICE YES 68 25 1.39 3.69 GT 1.7819 AG 1.3996 0.1602 1419 0
PCDHA11--PCDHAC2 95 0 47.50 0.00 PCDHA11^ENSG00000249158.7 4312 chr5:140871494:+ PCDHAC2^ENSG00000243232.6 11430 chr5:140978949:+ INCL_NON_REF_SPLICE YES 68 52 1.39 1.81 GT 1.7819 AG 1.3996 0.1602 1466 0
PMS2P8--CCDC146 81 0 81.00 0.00 PMS2P8^ENSG00000273897.1 3705 chr7:73041421:+ CCDC146^ENSG00000135205.15 10191 chr7:77167658:+ ONLY_REF_SPLICE YES 60 3 1.34 20.50 GT 1.4566 AG 1.7465 0.2731 6786 0
PMS2P8--CCDC146 17 0 17.00 0.00 PMS2P8^ENSG00000273897.1 3705 chr7:73041421:+ CCDC146^ENSG00000135205.15 11358 chr7:77236947:+ ONLY_REF_SPLICE YES 60 44 0.30 0.40 GT 1.4566 AG 1.9329 0.0573 5731 0
PMS2P8--CCDC146 10 0 10.00 0.00 PMS2P8^ENSG00000273897.1 4794 chr7:73044560:+ CCDC146^ENSG00000135205.15 10191 chr7:77167658:+ ONLY_REF_SPLICE YES 43 3 0.25 2.75 GT 1.8323 AG 1.7465 0.0337 7283 0
PMS2P8--CCDC146 1 0 1.00 0.00 PMS2P8^ENSG00000273897.1 4794 chr7:73044560:+ CCDC146^ENSG00000135205.15 11358 chr7:77236947:+ ONLY_REF_SPLICE YES 43 44 0.05 0.04 GT 1.8323 AG 1.9329 0.0034 6311 0
PMS2P8--CCDC146 1 0 1.00 0.00 PMS2P8^ENSG00000273897.1 3705 chr7:73041421:+ CCDC146^ENSG00000135205.15 12441 chr7:77241691:+ ONLY_REF_SPLICE YES 60 47 0.03 0.04 GT 1.4566 AG 1.7465 0.0034 4799 0
TLK2--AC240565.1 77 0 77.00 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 462 43 0.17 1.77 GT 1.8892 AG 1.8892 0.2597 1734 0
NRG4--TBCA 74 0 74.00 0.00 NRG4^ENSG00000169752.17 9102 chr15:76009200:- TBCA^ENSG00000171530.15 28489 chr5:77708347:- ONLY_REF_SPLICE YES 117 1771 0.64 0.04 GT 1.9656 AG 1.7465 0.2495 3565 0
TVP23C--CDRT4 73 1 73.00 1.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 64 4 1.15 15.00 GT 1.9329 AG 1.9899 0.2496 1215 0
TVP23C--CDRT4 38 0 38.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 64 35 0.60 1.08 GT 1.9329 AG 1.6402 0.1281 137 0
TVP23C--CDRT4 12 0 12.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 42 4 0.30 2.60 GT 1.9086 AG 1.9899 0.0405 1774 0
TVP23C--CDRT4 5 0 5.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 13 4 0.43 1.20 GT 1.8892 AG 1.9899 0.0169 1949 0
TVP23C--CDRT4 4 0 4.00 0.00 TVP23C^ENSG00000175106.17 3486 chr17:15555282:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 131 35 0.04 0.14 GT 1.5546 AG 1.6402 0.0135 1302 0
TVP23C--CDRT4 4 0 4.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 42 35 0.12 0.14 GT 1.9086 AG 1.6402 0.0135 697 0
TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 13 35 0.21 0.08 GT 1.8892 AG 1.6402 0.0067 873 0
TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 1159 chr17:15563437:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 211 35 0.01 0.06 GT 1.9656 AG 1.6402 0.0034 1139 0
C1QTNF3--AMACR 45 2 45.00 2.00 C1QTNF3^ENSG00000082196.21 7818 chr5:34020587:- AMACR^ENSG00000242110.8 14880 chr5:34005899:- INCL_NON_REF_SPLICE YES 137 94 0.35 0.51 GT 1.9086 AG 1.9086 0.1584 1362 0
C1QTNF3--AMACR 1 0 1.00 0.00 C1QTNF3^ENSG00000082196.21 5152 chr5:34028754:- AMACR^ENSG00000242110.8 14880 chr5:34005899:- ONLY_REF_SPLICE YES 227 94 0.01 0.02 GT 1.9086 AG 1.9086 0.0034 1134 0
EFL1--GOLGA6L11P 41 0 41.00 0.00 EFL1^ENSG00000140598.15 16923 chr15:82214717:- GOLGA6L11P^ENSG00000223698.3 29147 chrY:24169914:+ ONLY_REF_SPLICE YES 126 2 0.33 14.00 GT 1.9086 AG 1.5058 0.1383 2639 0
UBE2O--ZIC1 32 0 32.00 0.00 UBE2O^ENSG00000175931.13 1428 chr17:76452725:- ZIC1^ENSG00000152977.10 28482 chr3:147507941:+ ONLY_REF_SPLICE YES 565 1 0.06 16.50 GT 1.7056 AG 1.9329 0.1079 1223 0
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