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aih-tih-sc-64cd51-R1_A23YTGFLT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0021/A23YTGFLT4/nfcore_rnafusion__d2190e45--20260603-105009/fusioninspector/aih-tih-sc-64cd51-R1_A23YTGFLT4_1.FusionInspector.fusions.abridged.tsv
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7.1 KB
Workflow Run
dev_rna_exp0021-d2190e45
Published
Jun 03, 2026 3:35 PM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
NUP214--LAMC3 180 2 180.00 2.00 NUP214^ENSG00000126883.17 21863 chr9:131164144:+ LAMC3^ENSG00000050555.19 76958 chr9:131087476:+ ONLY_REF_SPLICE YES 641 324 0.29 0.56 GT 1.9219 AG 1.9329 0.6135 1922 0
NUP214--LAMC3 3 0 3.00 0.00 NUP214^ENSG00000126883.17 17404 chr9:131150693:+ LAMC3^ENSG00000050555.19 77218 chr9:131087736:+ INCL_NON_REF_SPLICE YES 620 523 0.01 0.01 GA 1.8892 GC 1.6895 0.0101 1129 0
NUP214--LAMC3 2 0 2.00 0.00 NUP214^ENSG00000126883.17 21863 chr9:131164144:+ LAMC3^ENSG00000050555.19 78300 chr9:131091537:+ ONLY_REF_SPLICE YES 641 423 0.00 0.01 GT 1.9219 AG 1.8323 0.0067 1018 0
PTPN12--GNAI1 110 1 110.00 1.00 PTPN12^ENSG00000127947.16 1351 chr7:77537645:+ GNAI1^ENSG00000127955.17 32145 chr7:79915067:+ ONLY_REF_SPLICE YES 922 0 0.12 112.00 GT 1.9086 AG 1.6895 0.3742 4011 0
PTPN12--GNAI1 41 0 41.00 0.00 PTPN12^ENSG00000127947.16 1351 chr7:77537645:+ GNAI1^ENSG00000127955.17 33246 chr7:79956970:+ ONLY_REF_SPLICE YES 922 0 0.05 42.00 GT 1.9086 AG 1.4566 0.1382 3504 0
PSME4--ACYP2 107 1 107.00 0.58 PSME4^ENSG00000068878.15 23787 chr2:53906598:- ACYP2^ENSG00000170634.13 69371 chr2:54304688:+ ONLY_REF_SPLICE YES 309 224 0.35 0.48 GT 1.9656 AG 1.9219 0.3627 1398 0
PSME4--ACYP2 74 2 74.00 1.35 PSME4^ENSG00000068878.15 23787 chr2:53906598:- ACYP2^ENSG00000170634.13 67214 chr2:54222997:+ ONLY_REF_SPLICE YES 309 203 0.25 0.38 GT 1.9656 AG 1.6402 0.2541 1057 0
PSME4--ACYP2 4 2 4.00 0.07 PSME4^ENSG00000068878.15 23787 chr2:53906598:- ACYP2^ENSG00000170634.13 68301 chr2:54267296:+ ONLY_REF_SPLICE YES 309 229 0.02 0.03 GT 1.9656 AG 1.9329 0.0137 2012 0
SMARCA5--CACNA1C 102 1 102.00 0.71 SMARCA5^ENSG00000153147.6 5827 chr4:143525551:+ CACNA1C^ENSG00000151067.22 32699 chr12:2115224:+ ONLY_REF_SPLICE YES 619 188 0.17 0.55 GT 1.9329 AG 1.9899 0.3463 3342 0
SMARCA5--CACNA1C 41 1 41.00 0.29 SMARCA5^ENSG00000153147.6 6736 chr4:143526460:+ CACNA1C^ENSG00000151067.22 32699 chr12:2115224:+ ONLY_REF_SPLICE YES 296 188 0.14 0.23 GT 1.3753 AG 1.9899 0.1392 2882 0
TRMT2A--PRODH 75 2 75.00 1.58 TRMT2A^ENSG00000099899.15 5690 chr22:20112703:- PRODH^ENSG00000100033.17 16123 chr22:18922933:- INCL_NON_REF_SPLICE YES 627 194 0.12 0.40 GT 1.6729 AG 1.9899 0.2581 390 0
TRMT2A--PRODH 15 2 15.00 0.32 TRMT2A^ENSG00000099899.15 6192 chr22:20112201:- PRODH^ENSG00000100033.17 16014 chr22:18923042:- INCL_NON_REF_SPLICE YES 1 71 9.00 0.25 GC 1.9656 CC 1.7465 0.0517 256 0
TRMT2A--PRODH 15 0 15.00 0.00 TRMT2A^ENSG00000099899.15 5482 chr22:20112911:- PRODH^ENSG00000100033.17 16123 chr22:18922933:- ONLY_REF_SPLICE YES 687 194 0.02 0.08 GT 1.8892 AG 1.9899 0.0506 483 0
TRMT2A--PRODH 5 2 5.00 0.11 TRMT2A^ENSG00000099899.15 5920 chr22:20112473:- PRODH^ENSG00000100033.17 16123 chr22:18922933:- INCL_NON_REF_SPLICE YES 72 194 0.11 0.04 GT 1.9656 AG 1.9899 0.0173 329 0
TRMT2A--PRODH 3 0 3.00 0.00 TRMT2A^ENSG00000099899.15 5690 chr22:20112703:- PRODH^ENSG00000100033.17 19258 chr22:18919798:- INCL_NON_REF_SPLICE YES 627 432 0.01 0.01 GT 1.6729 AG 1.7819 0.0101 138 0
TRMT2A--PRODH 3 0 3.00 0.00 TRMT2A^ENSG00000099899.15 5482 chr22:20112911:- PRODH^ENSG00000100033.17 19258 chr22:18919798:- ONLY_REF_SPLICE YES 687 432 0.01 0.01 GT 1.8892 AG 1.7819 0.0101 61 1
TVP23C--CDRT4 75 1 75.00 0.61 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 70 8 1.08 8.56 GT 1.9329 AG 1.9899 0.2549 1215 0
TVP23C--CDRT4 48 1 48.00 0.39 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 70 33 0.70 1.47 GT 1.9329 AG 1.6402 0.1631 137 0
TVP23C--CDRT4 38 0 38.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 326 8 0.12 4.33 GT 1.8323 AG 1.9899 0.1281 2126 0
TVP23C--CDRT4 28 0 28.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 326 33 0.09 0.85 GT 1.8323 AG 1.6402 0.0944 1363 0
TVP23C--CDRT4 9 0 9.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 12 8 0.77 1.11 GT 1.8892 AG 1.9899 0.0303 1949 0
TVP23C--CDRT4 3 0 3.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 12 33 0.31 0.12 GT 1.8892 AG 1.6402 0.0101 873 0
TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- ONLY_REF_SPLICE YES 326 0 0.01 3.00 GT 1.8323 AG 1.8892 0.0067 1044 0
TLK2--AC240565.1 52 0 52.00 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 357 80 0.15 0.65 GT 1.8892 AG 1.8892 0.1753 1734 0
AC015911.9--SLFN12L 38 3 38.00 3.00 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 6142 chr17:35480195:- ONLY_REF_SPLICE YES 0 30 42.00 1.35 GT 1.9329 AG 1.8892 0.1382 533 0
AC015911.9--SLFN12L 15 0 15.00 0.00 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000286065.2 8152 chr17:35478185:- ONLY_REF_SPLICE YES 0 50 16.00 0.31 GT 1.9329 AG 1.9329 0.0506 1380 0
AC015911.9--SLFN12L 3 0 3.00 0.00 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 9263 chr17:35475485:- ONLY_REF_SPLICE YES 0 59 4.00 0.07 GT 1.9329 AG 1.7968 0.0101 508 0
CAAP1--LRRC19 33 0 33.00 0.00 CAAP1^ENSG00000120159.13 4924 chr9:26884810:- LRRC19^ENSG00000184434.8 15242 chr9:26999703:- ONLY_REF_SPLICE YES 225 24 0.15 1.36 GT 1.8892 AG 1.9219 0.1112 1571 0
CAAP1--LRRC19 2 0 2.00 0.00 CAAP1^ENSG00000120159.13 4924 chr9:26884810:- LRRC19^ENSG00000184434.8 16332 chr9:26998241:- ONLY_REF_SPLICE YES 225 10 0.01 0.27 GT 1.8892 AG 1.8892 0.0067 1114 0
SSR1--AL031123.1 30 0 30.00 0.00 SSR1^ENSG00000124783.14 4447 chr6:7309917:- AL031123.1^ENSG00000226281.4 27984 chr6:6711858:- ONLY_REF_SPLICE YES 879 0 0.04 31.00 GT 1.9656 AG 1.9656 0.1011 4117 0
CCDC169--SOHLH2 28 0 28.00 0.00 CCDC169^ENSG00000242715.8 10007 chr13:36248606:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- ONLY_REF_SPLICE YES 3 2 7.25 9.67 GT 1.8295 AG 1.7232 0.0944 1362 0
FRAS1--TBCK 23 0 23.00 0.00 FRAS1^ENSG00000138759.19 2795 chr4:78066016:+ TBCK^ENSG00000145348.17 96763 chr4:106308989:- ONLY_REF_SPLICE YES 70 206 0.34 0.12 GT 1.7819 AG 1.8323 0.0775 3185 0
FRAS1--TBCK 1 0 1.00 0.00 FRAS1^ENSG00000138759.19 2795 chr4:78066016:+ TBCK^ENSG00000145348.17 99013 chr4:106295166:- ONLY_REF_SPLICE YES 70 350 0.03 0.01 GT 1.7819 AG 1.9656 0.0034 4486 0
GALNT17--AUTS2 13 0 13.00 0.00 GALNT17^ENSG00000185274.12 1897 chr7:71133040:+ AUTS2^ENSG00000158321.18 31805 chr7:70118132:+ ONLY_REF_SPLICE YES 42 290 0.33 0.05 GT 1.9329 AG 1.8256 0.0438 711 0
SCLT1--LINC02173 10 0 10.00 0.00 SCLT1^ENSG00000151466.12 2599 chr4:129082306:- LINC02173^ENSG00000249613.2 40907 chr4:106434612:+ ONLY_REF_SPLICE YES 137 0 0.08 11.00 GT 1.8892 AG 1.9086 0.0337 3418 0
36 rows