File Info
- Filename
- FFPE_V4_0002_RNA_0002_A23YTGFLT4_1.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0021/A23YTGFLT4/nfcore_rnafusion__d2190e45--20260603-105009/fusioninspector/FFPE_V4_0002_RNA_0002_A23YTGFLT4_1.FusionInspector.fusions.abridged.tsv
- Size
- 7.1 KB
- Workflow Run
- dev_rna_exp0021-d2190e45
- Published
- Jun 03, 2026 3:41 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| TMPRSS2--ERG | 4581 | 0 | 4581.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 53 | 4582.00 | 84.85 | GT | 1.6895 | AG | 1.9219 | 15.9879 | 1104 | 0 |
| TMPRSS2--ERG | 3 | 0 | 3.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4653 | chr21:41508080:- | ERG^ENSG00000157554.19 | 28753 | chr21:38584943:- | INCL_NON_REF_SPLICE | YES | 0 | 53 | 4.00 | 0.07 | TG | 1.6402 | GT | 1.8295 | 0.0105 | 1106 | 0 |
| TMPRSS2--ERG | 3 | 0 | 3.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4654 | chr21:41508079:- | ERG^ENSG00000157554.19 | 29901 | chr21:38575699:- | INCL_NON_REF_SPLICE | YES | 0 | 782 | 4.00 | 0.01 | GA | 1.7232 | CA | 1.9656 | 0.0105 | 1572 | 0 |
| FGFR3--TACC3 | 3524 | 1 | 3524.00 | 1.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 29 | 2418 | 117.53 | 1.46 | GT | 1.8892 | AG | 1.7819 | 12.3024 | 627 | 0 |
| FGFR3--TACC3 | 8 | 0 | 8.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9859 | chr4:1806915:+ | TACC3^ENSG00000013810.20 | 27591 | chr4:1739703:+ | INCL_NON_REF_SPLICE | YES | 139 | 2444 | 0.06 | 0.00 | TA | 1.8062 | GG | 1.7819 | 0.0279 | 636 | 0 |
| TPM3--NTRK1 | 981 | 3 | 981.00 | 3.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 6800 | 26 | 0.14 | 36.48 | GT | 1.9329 | AG | 1.6895 | 3.4342 | 355 | 0 |
| LMNA--NTRK1 | 827 | 2 | 827.00 | 1.99 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 2333 | 155 | 0.36 | 5.32 | GT | 1.7465 | AG | 1.5058 | 2.8932 | 947 | 0 |
| LMNA--NTRK1 | 6 | 1 | 6.00 | 0.01 | LMNA^ENSG00000160789.23 | 17735 | chr1:156130775:+ | NTRK1^ENSG00000198400.13 | 40292 | chr1:156874909:+ | INCL_NON_REF_SPLICE | NO | 2327 | 173 | 0.00 | 0.05 | GA | 1.8892 | TC | 1.4566 | 0.0209 | 950 | 0 |
| ETV6--NTRK3 | 718 | 2 | 718.00 | 2.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 2146 | 11 | 0.34 | 60.08 | GT | 1.7819 | AG | 1.9656 | 2.5128 | 1252 | 0 |
| FGFR3--BAIAP2L1 | 544 | 1 | 544.00 | 1.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 30 | 47 | 17.61 | 11.38 | GT | 1.8892 | AG | 1.8062 | 1.9021 | 1171 | 0 |
| NCOA4--RET | 543 | 0 | 543.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1831 | 197 | 0.30 | 2.75 | GT | 1.9086 | AG | 1.8323 | 1.8951 | 5144 | 0 |
| CCDC6--RET | 415 | 3 | 415.00 | 3.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1814 | 197 | 0.23 | 2.12 | GT | 1.8892 | AG | 1.8323 | 1.4589 | 2092 | 0 |
| KIF5B--RET | 392 | 1 | 392.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 1168 | 4 | 0.34 | 78.80 | GT | 1.9656 | AG | 1.9656 | 1.3716 | 3178 | 0 |
| SLC45A3--BRAF | 363 | 0 | 363.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 1 | 1119 | 182.00 | 0.33 | GT | 1.5628 | AG | 1.7465 | 1.2669 | 2599 | 0 |
| CD74--ROS1 | 330 | 2 | 330.00 | 1.99 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 23040 | 12 | 0.01 | 25.62 | GT | 1.7819 | AG | 1.7465 | 1.1586 | 2407 | 0 |
| CD74--ROS1 | 3 | 1 | 3.00 | 0.01 | CD74^ENSG00000019582.16 | 4992 | chr5:150404678:- | ROS1^ENSG00000047936.11 | 48734 | chr6:117324412:- | INCL_NON_REF_SPLICE | YES | 23042 | 19 | 0.00 | 0.25 | AC | 1.9329 | TG | 1.8892 | 0.0105 | 2407 | 0 |
| EML4--ALK | 316 | 0 | 316.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 506 | 15 | 0.63 | 19.81 | GT | 1.6895 | AG | 1.9086 | 1.1029 | 1550 | 0 |
| SLC34A2--ROS1 | 278 | 8 | 278.00 | 7.96 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 12 | 287.00 | 22.08 | GT | 1.8892 | AG | 1.7465 | 0.998 | 999 | 0 |
| SLC34A2--ROS1 | 7 | 0 | 7.00 | 0.00 | SLC34A2^ENSG00000157765.13 | 4919 | chr4:25662806:+ | ROS1^ENSG00000047936.11 | 59140 | chr6:117321363:- | INCL_NON_REF_SPLICE | YES | 345 | 260 | 0.02 | 0.03 | TA | 1.8892 | AG | 1.7968 | 0.0244 | 2302 | 0 |
| SLC34A2--ROS1 | 3 | 4 | 3.00 | 0.04 | SLC34A2^ENSG00000157765.13 | 6088 | chr4:25664334:+ | ROS1^ENSG00000047936.11 | 58030 | chr6:117324410:- | INCL_NON_REF_SPLICE | YES | 0 | 30 | 8.00 | 0.26 | GA | 1.7465 | AT | 1.9086 | 0.0106 | 1004 | 0 |
| EGFR--SEPTIN14 | 259 | 0 | 259.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 7 | 34 | 32.50 | 7.43 | GT | 1.8892 | AG | 1.9899 | 0.9039 | 658 | 0 |
| PAX8--PPARG | 237 | 0 | 237.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 56 | 4 | 4.18 | 47.60 | GT | 1.8295 | AG | 1.9329 | 0.8271 | 1923 | 0 |
| TFG--NTRK1 | 225 | 0 | 225.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 1247 | 26 | 0.18 | 8.37 | GT | 1.9329 | AG | 1.6895 | 0.7853 | 883 | 0 |
| STX16--NPEPL1 | 196 | 0 | 196.00 | 0.00 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 1087 | 137 | 0.18 | 1.43 | GT | 1.7968 | AG | 1.8256 | 0.684 | 1940 | 0 |
| STX16--NPEPL1 | 6 | 0 | 6.00 | 0.00 | STX16^ENSG00000124222.22 | 7774 | chr20:58671297:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 1227 | 137 | 0.01 | 0.05 | GT | 1.8062 | AG | 1.8256 | 0.0209 | 2729 | 0 |
| STX16--NPEPL1 | 3 | 0 | 3.00 | 0.00 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 21146 | chr20:58698684:+ | ONLY_REF_SPLICE | YES | 1087 | 686 | 0.00 | 0.01 | GT | 1.7968 | AG | 1.9899 | 0.0105 | 2583 | 0 |
| TVP23C--CDRT4 | 67 | 5 | 67.00 | 3.57 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | INCL_NON_REF_SPLICE | YES | 152 | 5 | 0.48 | 12.17 | GT | 1.9329 | AG | 1.9899 | 0.2463 | 1215 | 0 |
| TVP23C--CDRT4 | 25 | 3 | 25.00 | 0.64 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 455 | 5 | 0.06 | 4.83 | GT | 1.8323 | AG | 1.9899 | 0.0895 | 2126 | 0 |
| TVP23C--CDRT4 | 20 | 1 | 20.00 | 0.14 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | INCL_NON_REF_SPLICE | YES | 152 | 30 | 0.14 | 0.71 | GT | 1.9329 | AG | 1.6402 | 0.0703 | 137 | 0 |
| TVP23C--CDRT4 | 15 | 4 | 15.00 | 0.57 | TVP23C^ENSG00000175106.17 | 12676 | chr17:15516419:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 16 | 5 | 1.18 | 3.33 | GT | 1.8892 | AG | 1.9899 | 0.0544 | 1949 | 0 |
| TVP23C--CDRT4 | 7 | 1 | 7.00 | 0.05 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | ONLY_REF_SPLICE | YES | 455 | 30 | 0.02 | 0.29 | GT | 1.8323 | AG | 1.6402 | 0.0246 | 1363 | 0 |
| TVP23C--CDRT4 | 2 | 1 | 2.00 | 0.01 | TVP23C^ENSG00000175106.17 | 12676 | chr17:15516419:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | ONLY_REF_SPLICE | YES | 16 | 30 | 0.24 | 0.13 | GT | 1.8892 | AG | 1.6402 | 0.007 | 873 | 0 |
| TVP23C--CDRT4 | 1 | 3 | 1.00 | 0.03 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 21051 | chr17:15453085:- | ONLY_REF_SPLICE | YES | 455 | 0 | 0.01 | 5.00 | GT | 1.8323 | AG | 1.8892 | 0.0036 | 1044 | 0 |
| TLK2--AC240565.1 | 59 | 0 | 59.00 | 0.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 540 | 28 | 0.11 | 2.07 | GT | 1.8892 | AG | 1.8892 | 0.2059 | 1734 | 0 |
| SOGA3--KIAA0408 | 12 | 1 | 12.00 | 1.00 | SOGA3^ENSG00000214338.10 | 11088 | chr6:127473080:- | KIAA0408^ENSG00000189367.15 | 15731 | chr6:127454101:- | INCL_NON_REF_SPLICE | YES | 0 | 9 | 14.00 | 1.40 | GT | 1.6895 | AG | 1.7465 | 0.0454 | 176 | 0 |
36 rows