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aih-tih-sc-816ec7-R1_A23YTGFLT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0021/A23YTGFLT4/nfcore_rnafusion__d2190e45--20260603-105009/fusioninspector/aih-tih-sc-816ec7-R1_A23YTGFLT4_1.FusionInspector.fusions.abridged.tsv
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9.8 KB
Workflow Run
dev_rna_exp0021-d2190e45
Published
Jun 03, 2026 3:41 PM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
USP43--SPECC1 383 1 383.00 0.66 USP43^ENSG00000154914.17 2439 chr17:9646136:+ SPECC1^ENSG00000128487.18 38631 chr17:20204333:+ ONLY_REF_SPLICE YES 190 311 2.02 1.23 GT 1.9656 AG 1.9656 1.2931 1281 0
USP43--SPECC1 198 1 198.00 0.34 USP43^ENSG00000154914.17 2439 chr17:9646136:+ SPECC1^ENSG00000128487.18 41211 chr17:20227413:+ ONLY_REF_SPLICE YES 190 391 1.05 0.51 GT 1.9656 AG 1.5656 0.6685 1810 0
USP43--SPECC1 1 0 1.00 0.00 USP43^ENSG00000154914.17 1645 chr17:9645342:+ SPECC1^ENSG00000128487.18 38631 chr17:20204333:+ ONLY_REF_SPLICE YES 0 311 2.00 0.01 GT 1.9086 AG 1.9656 0.0034 996 0
USP43--SPECC1 1 0 1.00 0.00 USP43^ENSG00000154914.17 2439 chr17:9646136:+ SPECC1^ENSG00000128487.18 56832 chr17:20296961:+ ONLY_REF_SPLICE YES 190 490 0.01 0.00 GT 1.9656 AG 1.7819 0.0034 950 0
EFTUD2--SHC1P2 334 3 334.00 2.70 EFTUD2^ENSG00000108883.13 3744 chr17:44894417:- SHC1P2^ENSG00000267691.1 34414 chr17:44230006:- INCL_NON_REF_SPLICE YES 575 263 0.59 1.28 GT 1.8062 AG 1.7465 1.1349 1806 0
EFTUD2--SHC1P2 58 2 58.00 0.30 EFTUD2^ENSG00000108883.13 3744 chr17:44894417:- SHC1P2^ENSG00000267691.1 34417 chr17:44230003:- INCL_NON_REF_SPLICE YES 575 265 0.11 0.23 GT 1.8062 AG 1.8295 0.1965 1805 0
NSF--CCDC57 189 1 189.00 0.98 NSF^ENSG00000073969.18 14236 chr17:46694662:+ CCDC57^ENSG00000176155.19 31412 chr17:82201952:- ONLY_REF_SPLICE YES 305 270 0.62 0.70 GT 1.6049 AG 1.7968 0.6403 3068 0
NSF--CCDC57 8 0 8.00 0.00 NSF^ENSG00000073969.18 14236 chr17:46694662:+ CCDC57^ENSG00000176155.19 31606 chr17:82201758:- INCL_NON_REF_SPLICE YES 305 822 0.03 0.01 GT 1.6049 AG 1.6049 0.027 2908 0
NSF--CCDC57 4 1 4.00 0.02 NSF^ENSG00000073969.18 14236 chr17:46694662:+ CCDC57^ENSG00000176155.19 29926 chr17:82208048:- ONLY_REF_SPLICE YES 305 125 0.02 0.05 GT 1.6049 AG 1.9086 0.0136 4332 0
NSF--CCDC57 1 0 1.00 0.00 NSF^ENSG00000073969.18 14236 chr17:46694662:+ CCDC57^ENSG00000176155.19 33942 chr17:82195364:- ONLY_REF_SPLICE YES 305 457 0.01 0.00 GT 1.6049 AG 1.9219 0.0034 1688 0
MAP2K4--METTL16 145 0 145.00 0.00 MAP2K4^ENSG00000065559.15 4393 chr17:12054991:+ METTL16^ENSG00000127804.13 24971 chr17:2477885:- ONLY_REF_SPLICE YES 186 65 0.78 2.21 GT 1.4295 AG 1.7056 0.4887 1517 0
MAP2K4--METTL16 44 0 44.00 0.00 MAP2K4^ENSG00000065559.15 1173 chr17:12021001:+ METTL16^ENSG00000127804.13 24971 chr17:2477885:- ONLY_REF_SPLICE YES 330 65 0.14 0.68 GT 1.9329 AG 1.7056 0.1483 2322 0
TLK2--FAM157A 104 0 104.00 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ FAM157A^ENSG00000236438.7 45187 chr3:198180755:+ ONLY_REF_SPLICE YES 440 94 0.24 1.11 GT 1.8892 AG 1.8892 0.3505 2733 0
STX16--NPEPL1 100 2 100.00 1.96 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 588 34 0.17 2.94 GT 1.7968 AG 1.8256 0.3437 1940 0
STX16--NPEPL1 2 1 2.00 0.02 STX16^ENSG00000124222.22 7774 chr20:58671297:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 682 34 0.01 0.11 GT 1.8062 AG 1.8256 0.0068 2729 0
STX16--NPEPL1 2 1 2.00 0.02 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 19290 chr20:58693737:+ ONLY_REF_SPLICE YES 588 1145 0.01 0.00 GT 1.7968 AG 1.7819 0.0068 1248 0
STX16--NPEPL1 1 0 1.00 0.00 STX16^ENSG00000124222.22 7080 chr20:58670603:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 835 34 0.00 0.06 GT 1.9086 AG 1.8256 0.0034 2386 0
TVP23C--CDRT4 75 0 75.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 90 8 0.84 8.44 GT 1.9329 AG 1.9899 0.2528 1215 0
TVP23C--CDRT4 46 0 46.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 331 8 0.14 5.22 GT 1.8323 AG 1.9899 0.155 2126 0
TVP23C--CDRT4 15 0 15.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 90 33 0.18 0.47 GT 1.9329 AG 1.6402 0.0506 137 0
TVP23C--CDRT4 11 0 11.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 17 8 0.67 1.33 GT 1.8892 AG 1.9899 0.0371 1949 0
TVP23C--CDRT4 9 0 9.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 331 33 0.03 0.29 GT 1.8323 AG 1.6402 0.0303 1363 0
LY75--CD302 48 1 48.00 0.56 LY75^ENSG00000054219.11 36771 chr2:159808449:- CD302^ENSG00000241399.7 44932 chr2:159783469:- ONLY_REF_SPLICE YES 462 159 0.11 0.31 GT 1.8892 AG 1.7819 0.1637 1759 0
LY75--CD302 37 1 37.00 0.44 LY75^ENSG00000054219.11 37939 chr2:159806973:- CD302^ENSG00000241399.7 44932 chr2:159783469:- ONLY_REF_SPLICE YES 491 159 0.08 0.24 GT 1.9656 AG 1.7819 0.1262 1267 0
LY75--CD302 3 0 3.00 0.00 LY75^ENSG00000054219.11 37939 chr2:159806973:- CD302^ENSG00000241399.7 46577 chr2:159780998:- ONLY_REF_SPLICE YES 491 287 0.01 0.01 GT 1.9656 AG 1.8323 0.0101 936 0
LY75--CD302 2 0 2.00 0.00 LY75^ENSG00000054219.11 36771 chr2:159808449:- CD302^ENSG00000241399.7 46577 chr2:159780998:- ONLY_REF_SPLICE YES 462 287 0.01 0.01 GT 1.8892 AG 1.8323 0.0067 114 0
DIS3L2--ALPI 45 0 45.00 0.00 DIS3L2^ENSG00000144535.20 32139 chr2:232336601:+ ALPI^ENSG00000163295.5 39243 chr2:232456349:+ INCL_NON_REF_SPLICE YES 300 86 0.15 0.53 GT 1.7968 AG 1.7819 0.1517 402 0
DIS3L2--ALPI 5 0 5.00 0.00 DIS3L2^ENSG00000144535.20 31412 chr2:232335874:+ ALPI^ENSG00000163295.5 39243 chr2:232456349:+ ONLY_REF_SPLICE YES 265 86 0.02 0.07 GT 1.5850 AG 1.7819 0.0169 100 0
EFTUD2--UBTF 45 0 45.00 0.00 EFTUD2^ENSG00000108883.13 3744 chr17:44894417:- UBTF^ENSG00000108312.15 37522 chr17:44218296:- ONLY_REF_SPLICE YES 582 584 0.08 0.08 GT 1.8062 AG 1.5329 0.1517 2565 0
EFTUD2--UBTF 5 0 5.00 0.00 EFTUD2^ENSG00000108883.13 3744 chr17:44894417:- UBTF^ENSG00000108312.15 34346 chr17:44221472:- INCL_NON_REF_SPLICE YES 582 3 0.01 1.50 GT 1.8062 AG 1.5058 0.0169 2283 0
PCDHA4--PCDHAC1 44 0 22.00 0.00 PCDHA4^ENSG00000204967.12 3644 chr5:140809572:+ PCDHAC1^ENSG00000248383.5 19813 chr5:140978949:+ ONLY_REF_SPLICE YES 50 8 0.88 5.00 GT 1.9656 AG 1.3996 0.0742 1304 0
PCDHA4--PCDHAC2 44 0 22.00 0.00 PCDHA4^ENSG00000204967.12 3644 chr5:140809572:+ PCDHAC2^ENSG00000243232.6 18677 chr5:140978949:+ ONLY_REF_SPLICE YES 50 26 0.88 1.67 GT 1.9656 AG 1.3996 0.0742 1213 0
AC104041.1--APBA1 43 0 43.00 0.00 AC104041.1^ENSG00000259692.6 12542 chr15:81870928:- APBA1^ENSG00000107282.8 30634 chr9:69476143:- ONLY_REF_SPLICE YES 1 18 22.00 2.32 GT 1.9656 AG 1.5058 0.1449 3464 0
ADORA2B--SSH2 39 0 39.00 0.00 ADORA2B^ENSG00000170425.3 1667 chr17:15945583:+ SSH2^ENSG00000141298.19 13830 chr17:29793937:- ONLY_REF_SPLICE YES 191 1107 0.21 0.04 GT 1.8062 AG 1.6402 0.1315 1344 0
AC015911.9--SLFN12L 32 1 32.00 1.00 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 6142 chr17:35480195:- ONLY_REF_SPLICE YES 0 66 34.00 0.51 GT 1.9329 AG 1.8892 0.1113 533 0
AC015911.9--SLFN12L 7 0 7.00 0.00 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000286065.2 8152 chr17:35478185:- ONLY_REF_SPLICE YES 0 88 8.00 0.09 GT 1.9329 AG 1.9329 0.0236 1380 0
SNU13--LLPH 27 0 27.00 0.00 SNU13^ENSG00000100138.15 6709 chr22:41680244:- LLPH^ENSG00000139233.7 14346 chr12:66129113:- ONLY_REF_SPLICE YES 861 154 0.03 0.18 GT 1.7056 AG 1.8295 0.091 2440 0
CRYZL2P--SEC16B 17 1 17.00 0.81 CRYZL2P^ENSG00000242193.11 8825 chr1:178026155:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 0 30 19.00 0.61 GT 1.9086 AG 1.5546 0.06 2589 0
CRYZL2P--SEC16B 3 2 3.00 1.19 CRYZL2P^ENSG00000242193.11 11220 chr1:178022440:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 0 30 6.00 0.19 GT 1.9656 AG 1.5546 0.0141 2635 0
CRYZL2P--SEC16B 1 0 1.00 0.00 CRYZL2P^ENSG00000242193.11 8825 chr1:178026155:- SEC16B^ENSG00000120341.18 26248 chr1:177958975:- ONLY_REF_SPLICE YES 0 148 2.00 0.01 GT 1.9086 AG 1.7465 0.0034 3251 0
METTL16--MAP2K4 17 0 17.00 0.00 METTL16^ENSG00000127804.13 8197 chr17:2464208:- MAP2K4^ENSG00000065559.15 29075 chr17:12054889:+ ONLY_REF_SPLICE YES 141 272 0.13 0.07 GT 1.2419 AG 1.7465 0.0573 5714 0
METTL16--MAP2K4 4 0 4.00 0.00 METTL16^ENSG00000127804.13 11438 chr17:2438109:- MAP2K4^ENSG00000065559.15 29075 chr17:12054889:+ ONLY_REF_SPLICE YES 160 272 0.03 0.02 GT 1.9656 AG 1.7465 0.0135 4708 0
METTL16--MAP2K4 1 0 1.00 0.00 METTL16^ENSG00000127804.13 5938 chr17:2473524:- MAP2K4^ENSG00000065559.15 29075 chr17:12054889:+ ONLY_REF_SPLICE YES 162 272 0.01 0.01 GT 1.8892 AG 1.7465 0.0034 3834 0
RAP1GAP2--NXN 15 0 15.00 0.00 RAP1GAP2^ENSG00000132359.15 6658 chr17:2905368:+ NXN^ENSG00000167693.17 45286 chr17:826078:- ONLY_REF_SPLICE YES 277 134 0.06 0.12 GT 1.7968 AG 1.9329 0.0506 3356 0
LINC00858--ITGA1 13 0 13.00 0.00 LINC00858^ENSG00000229404.6 2177 chr10:84280065:+ ITGA1^ENSG00000213949.10 19079 chr5:52864763:+ ONLY_REF_SPLICE YES 1 359 7.00 0.04 GT 1.9656 AG 1.5219 0.0438 2492 0
TTC25--ACLY 12 0 12.00 0.00 TTC25^ENSG00000204815.10 1221 chr17:41930837:+ ACLY^ENSG00000131473.17 18013 chr17:41913896:- ONLY_REF_SPLICE YES 20 3515 0.62 0.00 GT 1.9086 AG 1.9656 0.0404 1983 0
TTC25--ACLY 1 0 1.00 0.00 TTC25^ENSG00000204815.10 1221 chr17:41930837:+ ACLY^ENSG00000131473.17 18009 chr17:41913900:- ONLY_REF_SPLICE YES 20 3325 0.10 0.00 GT 1.9086 AG 1.8323 0.0034 1986 0
KMT2E--AC007384.1 11 0 11.00 0.00 KMT2E^ENSG00000005483.21 1346 chr7:105014535:+ AC007384.1^ENSG00000237513.2 39539 chr7:105000193:+ ONLY_REF_SPLICE YES 602 6 0.02 1.71 GT 1.9656 AG 1.9086 0.0371 3486 0
HOXB7--MAPK8IP1P2 4 0 4.00 0.00 HOXB7^ENSG00000260027.5 2558 chr17:48610519:- MAPK8IP1P2^ENSG00000263503.1 7933 chr17:45602061:- INCL_NON_REF_SPLICE YES 62 85 0.08 0.06 GT 1.8892 AG 1.9086 0.0135 209 0
50 rows