#==================================================
#All numbers are READ count
#==================================================

Total records:                          648071890

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        64346727
Unmapped reads:                         4095644
mapq < mapq_cut (non-unique):           24394525

mapq >= mapq_cut (unique):              555234994
Read-1:                                 277849970
Read-2:                                 277385024
Reads map to '+':                       277674099
Reads map to '-':                       277560895
Non-splice reads:                       360031513
Splice reads:                           195203481
Reads mapped in proper pairs:           553391884
Proper-paired reads map to different chrom:0