Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ee/9c81247f2b1151d450b8c8cd8c82a6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ee/9c81247f2b1151d450b8c8cd8c82a6/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/5c1a47d6410920b14cd67e0f22f189/aih-tih-sc-3b436b-R1_A23YTGFLT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/24/83b3703cd06a8bca2f26a43503c1ec/aih-tih-sc-3b436b-R1_A23YTGFLT4_1
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-3b436b-R1_A23YTGFLT4_1/abundance.h5
Successfully converted aih-tih-sc-3b436b-R1_A23YTGFLT4_1/abundance.h5 to aih-tih-sc-3b436b-R1_A23YTGFLT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-3b436b-R1_A23YTGFLT4_1
  Mean Fragment Length: 146.0 bp
  Median Fragment Length: 132.0 bp
  pct_mito_est_counts: 0.026%
  pct_ribo_est_counts: 1.527%
  pct_hk_est_counts: 0.582%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.055%
  pct_ribo_tpm: 4.485%
  pct_hk_tpm: 0.817%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 6.457%