File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/72/38e19155768eac9a77a490b87914bc/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 03 21:28:33
                             Started mapping on |	Jun 03 21:34:55
                                    Finished on |	Jun 03 22:28:10
       Mapping speed, Million of reads per hour |	334.29

                          Number of input reads |	296685279
                      Average input read length |	251
                                    UNIQUE READS:
                   Uniquely mapped reads number |	284658237
                        Uniquely mapped reads % |	95.95%
                          Average mapped length |	250.61
                       Number of splices: Total |	305077845
            Number of splices: Annotated (sjdb) |	300557078
                       Number of splices: GT/AG |	301416774
                       Number of splices: GC/AG |	2283918
                       Number of splices: AT/AC |	260357
               Number of splices: Non-canonical |	1116796
                      Mismatch rate per base, % |	0.20%
                         Deletion rate per base |	0.02%
                        Deletion average length |	2.04
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.69
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	9062334
             % of reads mapped to multiple loci |	3.05%
        Number of reads mapped to too many loci |	547571
             % of reads mapped to too many loci |	0.18%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2021292
                 % of reads unmapped: too short |	0.68%
                Number of reads unmapped: other |	395845
                     % of reads unmapped: other |	0.13%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%