File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/de/2a8e5689755a2850ecc6f06446455c/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 03 21:00:16
                             Started mapping on |	Jun 03 21:07:05
                                    Finished on |	Jun 03 22:10:16
       Mapping speed, Million of reads per hour |	281.57

                          Number of input reads |	296504730
                      Average input read length |	242
                                    UNIQUE READS:
                   Uniquely mapped reads number |	284963117
                        Uniquely mapped reads % |	96.11%
                          Average mapped length |	241.37
                       Number of splices: Total |	282126316
            Number of splices: Annotated (sjdb) |	277751759
                       Number of splices: GT/AG |	278376263
                       Number of splices: GC/AG |	2344483
                       Number of splices: AT/AC |	214017
               Number of splices: Non-canonical |	1191553
                      Mismatch rate per base, % |	0.29%
                         Deletion rate per base |	0.02%
                        Deletion average length |	2.12
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.72
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	8828195
             % of reads mapped to multiple loci |	2.98%
        Number of reads mapped to too many loci |	425613
             % of reads mapped to too many loci |	0.14%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2041029
                 % of reads unmapped: too short |	0.69%
                Number of reads unmapped: other |	246776
                     % of reads unmapped: other |	0.08%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%