[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-d1f1a3-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	309715731
Known Splicing Events:	306940377
Partial Novel Splicing Events:	1399651
Novel Splicing Events:	1256653
Filtered Splicing Events:	119050

Total splicing  Junctions:	552634
Known Splicing Junctions:	279414
Partial Novel Splicing Junctions:	147934
Novel Splicing Junctions:	125286

===================================================================
Create BED file ...
Create Interact file ...