File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/b7a02c74aad4ca2cdafa90a5f68192/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 03 21:02:42
                             Started mapping on |	Jun 03 21:09:16
                                    Finished on |	Jun 03 21:39:50
       Mapping speed, Million of reads per hour |	406.42

                          Number of input reads |	207049612
                      Average input read length |	216
                                    UNIQUE READS:
                   Uniquely mapped reads number |	196796787
                        Uniquely mapped reads % |	95.05%
                          Average mapped length |	215.84
                       Number of splices: Total |	173228318
            Number of splices: Annotated (sjdb) |	167934075
                       Number of splices: GT/AG |	170594726
                       Number of splices: GC/AG |	1176433
                       Number of splices: AT/AC |	130757
               Number of splices: Non-canonical |	1326402
                      Mismatch rate per base, % |	0.34%
                         Deletion rate per base |	0.05%
                        Deletion average length |	2.29
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.59
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	8043083
             % of reads mapped to multiple loci |	3.88%
        Number of reads mapped to too many loci |	361411
             % of reads mapped to too many loci |	0.17%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	1573133
                 % of reads unmapped: too short |	0.76%
                Number of reads unmapped: other |	275198
                     % of reads unmapped: other |	0.13%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%