AIH curated blacklist: matched 12 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 205
Pass (FILTER=PASS): 6 (2.9%)
Fail (FILTER=FAIL): 199 (97.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 12
All 12 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 79
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 26
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 14
confidence_below_min(low<high): 12
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 8
confidence_below_min(medium<high);aih_curated_blacklist: 6
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 2
total_reads_below_min(4.0<8.0): 2
Breakdown by confidence:
high: 6 pass, 2 fail (total: 8)
low: 0 pass, 80 fail (total: 80)
medium: 0 pass, 117 fail (total: 117)
Arriba filter: 205 rows -> 6 PASS; wrote aih-tih-sc-ffabe0-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-ffabe0-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-ffabe0-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt