Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-e543dae6-5fea-4720-bfb6-150bf1ff20d4/82/1bfcba5045fc10a52ca200a4890a9a/dummy_file_fusioncatcher.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bc/d71476de5fff53f905caf0bf4f5def/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bc/d71476de5fff53f905caf0bf4f5def/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f9/23ba94cf30fca34eec023504ef89f7/aih-tih-sc-150e73-R1_A23YTGFLT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dc/2d089a8e38aecc48caebfc72a8f1ab/aih-tih-sc-150e73-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
==> STAGING COMPLETE (6 inputs)

Running application...
AGO2--TRAPPC9
starfusion
arriba
MAL2--DIPK1A
starfusion
LINC00665--WDR62
starfusion
arriba
TTBK2--SH2D3A
starfusion
arriba
TTC6--MIPOL1
starfusion
arriba
WDR92--PPP3R1
starfusion
GPR39--AC010974.2
starfusion
TLK2--AC240565.1
starfusion
ZNF875--ZNF793
starfusion
CPNE4--ACP3
arriba
ACP3--ACP3
arriba
PHF8--REPS2
arriba
PHF8--CBX1P4
arriba
TVP23C--CDRT4
arriba
KLRC4--KLRK1
arriba
CERS6--ABCB11
arriba
CERS6--DHRS9
arriba

  0%|          | 0/17 [00:00<?, ?it/s]
Processing AGO2--TRAPPC9:   0%|          | 0/17 [00:00<?, ?it/s]
Processing AGO2--TRAPPC9:   6%|▌         | 1/17 [00:00<00:01,  8.40it/s]
Processing MAL2--DIPK1A:   6%|▌         | 1/17 [00:00<00:01,  8.40it/s] 
Processing MAL2--DIPK1A:  12%|█▏        | 2/17 [00:00<00:01,  8.89it/s]
Processing LINC00665--WDR62:  12%|█▏        | 2/17 [00:00<00:01,  8.89it/s]
Processing LINC00665--WDR62:  18%|█▊        | 3/17 [00:00<00:01,  9.10it/s]
Processing TTBK2--SH2D3A:  18%|█▊        | 3/17 [00:00<00:01,  9.10it/s]   
Processing TTBK2--SH2D3A:  24%|██▎       | 4/17 [00:00<00:01,  9.20it/s]
Processing TTC6--MIPOL1:  24%|██▎       | 4/17 [00:00<00:01,  9.20it/s] 
Processing TTC6--MIPOL1:  29%|██▉       | 5/17 [00:00<00:01,  9.25it/s]
Processing WDR92--PPP3R1:  29%|██▉       | 5/17 [00:00<00:01,  9.25it/s]
Processing WDR92--PPP3R1:  35%|███▌      | 6/17 [00:00<00:01,  9.29it/s]
Processing GPR39--AC010974.2:  35%|███▌      | 6/17 [00:00<00:01,  9.29it/s]
Processing GPR39--AC010974.2:  41%|████      | 7/17 [00:00<00:01,  9.31it/s]
Processing TLK2--AC240565.1:  41%|████      | 7/17 [00:00<00:01,  9.31it/s] 
Processing TLK2--AC240565.1:  47%|████▋     | 8/17 [00:00<00:00,  9.33it/s]
Processing ZNF875--ZNF793:  47%|████▋     | 8/17 [00:00<00:00,  9.33it/s]  
Processing ZNF875--ZNF793:  53%|█████▎    | 9/17 [00:00<00:00,  9.34it/s]
Processing CPNE4--ACP3:  53%|█████▎    | 9/17 [00:00<00:00,  9.34it/s]   
Processing CPNE4--ACP3:  59%|█████▉    | 10/17 [00:01<00:00,  9.33it/s]
Processing ACP3--ACP3:  59%|█████▉    | 10/17 [00:01<00:00,  9.33it/s] 
Processing ACP3--ACP3:  65%|██████▍   | 11/17 [00:01<00:00,  9.30it/s]
Processing PHF8--REPS2:  65%|██████▍   | 11/17 [00:01<00:00,  9.30it/s]
Processing PHF8--REPS2:  71%|███████   | 12/17 [00:01<00:00,  9.28it/s]
Processing PHF8--CBX1P4:  71%|███████   | 12/17 [00:01<00:00,  9.28it/s]
Processing PHF8--CBX1P4:  76%|███████▋  | 13/17 [00:01<00:00,  9.31it/s]
Processing TVP23C--CDRT4:  76%|███████▋  | 13/17 [00:01<00:00,  9.31it/s]
Processing TVP23C--CDRT4:  82%|████████▏ | 14/17 [00:01<00:00,  9.31it/s]
Processing KLRC4--KLRK1:  82%|████████▏ | 14/17 [00:01<00:00,  9.31it/s] 
Processing KLRC4--KLRK1:  88%|████████▊ | 15/17 [00:01<00:00,  9.28it/s]
Processing CERS6--ABCB11:  88%|████████▊ | 15/17 [00:01<00:00,  9.28it/s]
Processing CERS6--ABCB11:  94%|█████████▍| 16/17 [00:01<00:00,  9.27it/s]
Processing CERS6--DHRS9:  94%|█████████▍| 16/17 [00:01<00:00,  9.27it/s] 
Processing CERS6--DHRS9: 100%|██████████| 17/17 [00:01<00:00,  9.29it/s]
Processing CERS6--DHRS9: 100%|██████████| 17/17 [00:01<00:00,  9.25it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory