AIH curated blacklist: matched 5 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 110
Pass (FILTER=PASS): 27 (24.5%)
Fail (FILTER=FAIL): 83 (75.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 5
All 5 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 8
confidence_below_min(medium<high): 8
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 6
confidence_below_min(low<high): 6
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 2
total_reads_below_min(6.0<8.0): 2
total_reads_below_min(4.0<8.0): 2
total_reads_below_min(3.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
Breakdown by confidence:
high: 27 pass, 9 fail (total: 36)
low: 0 pass, 43 fail (total: 43)
medium: 0 pass, 31 fail (total: 31)
Arriba filter: 110 rows -> 27 PASS; wrote aih-tih-sc-a558c6-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-a558c6-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-a558c6-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt