AIH curated blacklist: matched 5 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 102
Pass (FILTER=PASS): 7 (6.9%)
Fail (FILTER=FAIL): 95 (93.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 5
All 5 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 14
confidence_below_min(low<high): 12
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 7
confidence_below_min(medium<high): 5
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 1
total_reads_below_min(7.0<8.0): 1
total_reads_below_min(5.0<8.0): 1
total_reads_below_min(4.0<8.0): 1
Breakdown by confidence:
high: 7 pass, 3 fail (total: 10)
low: 0 pass, 42 fail (total: 42)
medium: 0 pass, 50 fail (total: 50)
Arriba filter: 102 rows -> 7 PASS; wrote aih-tih-sc-f7ac14-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-f7ac14-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-f7ac14-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt