File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/24/7a2c07c103cecc00735a56a717a656/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 03 21:02:43
                             Started mapping on |	Jun 03 21:09:19
                                    Finished on |	Jun 03 22:10:36
       Mapping speed, Million of reads per hour |	279.27

                          Number of input reads |	285242651
                      Average input read length |	255
                                    UNIQUE READS:
                   Uniquely mapped reads number |	275069269
                        Uniquely mapped reads % |	96.43%
                          Average mapped length |	254.29
                       Number of splices: Total |	307247551
            Number of splices: Annotated (sjdb) |	303164337
                       Number of splices: GT/AG |	303744785
                       Number of splices: GC/AG |	2102863
                       Number of splices: AT/AC |	240060
               Number of splices: Non-canonical |	1159843
                      Mismatch rate per base, % |	0.20%
                         Deletion rate per base |	0.02%
                        Deletion average length |	2.10
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.62
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	7545309
             % of reads mapped to multiple loci |	2.65%
        Number of reads mapped to too many loci |	492002
             % of reads mapped to too many loci |	0.17%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	1857164
                 % of reads unmapped: too short |	0.65%
                Number of reads unmapped: other |	278907
                     % of reads unmapped: other |	0.10%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%