Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/19f89c8bf1ff492efeab780fe900ea/aih-tih-sc-4bcd26-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/e2aa34bd3b78fb5a6e37c9d2f857f1/aih-tih-sc-4bcd26-R1_A23YTGFLT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-e543dae6-5fea-4720-bfb6-150bf1ff20d4/82/1bfcba5045fc10a52ca200a4890a9a/dummy_file_fusioncatcher.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/aa/421fe2d89e30aff61bc7207da46967/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/aa/421fe2d89e30aff61bc7207da46967/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
==> STAGING COMPLETE (6 inputs)

Running application...
PDXDC2P--PDPR
starfusion
arriba
AC100821.2--LYPLA1
starfusion
TVP23C--CDRT4
arriba
RBM14--RBM4B
arriba
AC092807.3--DDAH1
arriba
PCDHA10--PCDHAC1
arriba
PCDHA10--PCDHAC2
arriba
PCDHA10--PCDHA13
arriba
PCDHA6--PCDHAC1
arriba
PCDHA6--PCDHAC2
arriba
PCDHA6--PCDHA13
arriba

  0%|          | 0/11 [00:00<?, ?it/s]
Processing PDXDC2P--PDPR:   0%|          | 0/11 [00:00<?, ?it/s]
Processing PDXDC2P--PDPR:   9%|▉         | 1/11 [00:00<00:01,  9.22it/s]
Processing AC100821.2--LYPLA1:   9%|▉         | 1/11 [00:00<00:01,  9.22it/s]
Processing AC100821.2--LYPLA1:  18%|█▊        | 2/11 [00:00<00:00,  9.46it/s]
Processing TVP23C--CDRT4:  18%|█▊        | 2/11 [00:00<00:00,  9.46it/s]     
Processing TVP23C--CDRT4:  27%|██▋       | 3/11 [00:00<00:00,  9.54it/s]
Processing RBM14--RBM4B:  27%|██▋       | 3/11 [00:00<00:00,  9.54it/s] 
Processing RBM14--RBM4B:  36%|███▋      | 4/11 [00:00<00:00,  9.58it/s]
Processing AC092807.3--DDAH1:  36%|███▋      | 4/11 [00:00<00:00,  9.58it/s]
Processing AC092807.3--DDAH1:  45%|████▌     | 5/11 [00:00<00:00,  9.60it/s]
Processing PCDHA10--PCDHAC1:  45%|████▌     | 5/11 [00:00<00:00,  9.60it/s] 
Processing PCDHA10--PCDHAC1:  55%|█████▍    | 6/11 [00:00<00:00,  9.62it/s]
Processing PCDHA10--PCDHAC2:  55%|█████▍    | 6/11 [00:00<00:00,  9.62it/s]
Processing PCDHA10--PCDHAC2:  64%|██████▎   | 7/11 [00:00<00:00,  9.63it/s]
Processing PCDHA10--PCDHA13:  64%|██████▎   | 7/11 [00:00<00:00,  9.63it/s]
Processing PCDHA10--PCDHA13:  73%|███████▎  | 8/11 [00:00<00:00,  9.63it/s]
Processing PCDHA6--PCDHAC1:  73%|███████▎  | 8/11 [00:00<00:00,  9.63it/s] 
Processing PCDHA6--PCDHAC1:  82%|████████▏ | 9/11 [00:00<00:00,  9.64it/s]
Processing PCDHA6--PCDHAC2:  82%|████████▏ | 9/11 [00:00<00:00,  9.64it/s]
Processing PCDHA6--PCDHAC2:  91%|█████████ | 10/11 [00:01<00:00,  9.64it/s]
Processing PCDHA6--PCDHA13:  91%|█████████ | 10/11 [00:01<00:00,  9.64it/s]
Processing PCDHA6--PCDHA13: 100%|██████████| 11/11 [00:01<00:00,  9.64it/s]
Processing PCDHA6--PCDHA13: 100%|██████████| 11/11 [00:01<00:00,  9.60it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory