File Info
- Filename
- aih-tih-sc-4bcd26-R1_A23YTGFLT4_1.fusions.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/aa/421fe2d89e30aff61bc7207da46967/aih-tih-sc-4bcd26-R1_A23YTGFLT4_1.fusions.csv
- Size
- 2.7 KB
- Task
- NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (aih-tih-sc-4bcd26-R1_A23YTGFLT4_1)
- Attempt
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| PDXDC2P--PDPR | FusionGDB2 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * (0.000) | position: chr16:70031900#chr16:70156737,reading-frame: .,type: inversion,split_reads1: 35,split_reads2: 61,discordant_mates: 0,coverage1: 2381,coverage2: 2891,confidence: high | position: chr16:70031900:-#chr16:70156737:+,junction_reads: 97,spanning_reads: 0,ffmp: 0.4995 |
| AC100821.2--LYPLA1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr8:54044817:-#chr8:54055133:-,junction_reads: 10,spanning_reads: 0,ffmp: 0.0515 | ||
| TVP23C--CDRT4 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr17:15503098#chr17:15440285,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 34,split_reads2: 37,discordant_mates: 0,coverage1: 853,coverage2: 351,confidence: high | |
| RBM14--RBM4B | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr11:66617057#chr11:66677091,reading-frame: out-of-frame,type: inversion,split_reads1: 20,split_reads2: 16,discordant_mates: 0,coverage1: 2145,coverage2: 1349,confidence: high | ||
| AC092807.3--DDAH1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:85496166#chr1:85358847,reading-frame: .,type: deletion/read-through,split_reads1: 8,split_reads2: 22,discordant_mates: 0,coverage1: 72,coverage2: 418,confidence: high | ||
| PCDHA10--PCDHAC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 9,split_reads2: 14,discordant_mates: 0,coverage1: 170,coverage2: 692,confidence: high | ||
| PCDHA10--PCDHAC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 9,split_reads2: 14,discordant_mates: 0,coverage1: 170,coverage2: 692,confidence: high | ||
| PCDHA10--PCDHA13 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 9,split_reads2: 14,discordant_mates: 0,coverage1: 170,coverage2: 692,confidence: high | ||
| PCDHA6--PCDHAC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140830485#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 5,split_reads2: 7,discordant_mates: 0,coverage1: 127,coverage2: 692,confidence: high | ||
| PCDHA6--PCDHAC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140830485#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 5,split_reads2: 7,discordant_mates: 0,coverage1: 127,coverage2: 692,confidence: high | ||
| PCDHA6--PCDHA13 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140830485#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 5,split_reads2: 7,discordant_mates: 0,coverage1: 127,coverage2: 692,confidence: high |
12 rows