File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/b1c0c73c6ef9454af468a7f1e333d4/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 03 21:14:32
                             Started mapping on |	Jun 03 21:21:08
                                    Finished on |	Jun 03 22:28:34
       Mapping speed, Million of reads per hour |	264.16

                          Number of input reads |	296889510
                      Average input read length |	261
                                    UNIQUE READS:
                   Uniquely mapped reads number |	281520688
                        Uniquely mapped reads % |	94.82%
                          Average mapped length |	261.04
                       Number of splices: Total |	324908454
            Number of splices: Annotated (sjdb) |	320401946
                       Number of splices: GT/AG |	321187558
                       Number of splices: GC/AG |	2304416
                       Number of splices: AT/AC |	321094
               Number of splices: Non-canonical |	1095386
                      Mismatch rate per base, % |	0.18%
                         Deletion rate per base |	0.02%
                        Deletion average length |	1.89
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.88
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	12537622
             % of reads mapped to multiple loci |	4.22%
        Number of reads mapped to too many loci |	507366
             % of reads mapped to too many loci |	0.17%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2067546
                 % of reads unmapped: too short |	0.70%
                Number of reads unmapped: other |	256288
                     % of reads unmapped: other |	0.09%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%