AIH curated blacklist: matched 14 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 241
Pass (FILTER=PASS): 24 (10.0%)
Fail (FILTER=FAIL): 217 (90.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 14
All 14 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 42
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 28
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 26
confidence_below_min(low<high): 25
confidence_below_min(medium<high): 20
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
total_reads_below_min(3.0<8.0): 2
Breakdown by confidence:
high: 24 pass, 5 fail (total: 29)
low: 0 pass, 142 fail (total: 142)
medium: 0 pass, 70 fail (total: 70)
Arriba filter: 241 rows -> 24 PASS; wrote aih-tih-sc-56cab8-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-56cab8-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-56cab8-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt