File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/3e1ddce654fbb47ebbbe35dbc61f10/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 03 21:06:32
                             Started mapping on |	Jun 03 21:14:09
                                    Finished on |	Jun 03 22:20:08
       Mapping speed, Million of reads per hour |	269.33

                          Number of input reads |	296187060
                      Average input read length |	249
                                    UNIQUE READS:
                   Uniquely mapped reads number |	283897079
                        Uniquely mapped reads % |	95.85%
                          Average mapped length |	248.91
                       Number of splices: Total |	264315451
            Number of splices: Annotated (sjdb) |	260113954
                       Number of splices: GT/AG |	261177997
                       Number of splices: GC/AG |	1863219
                       Number of splices: AT/AC |	186708
               Number of splices: Non-canonical |	1087527
                      Mismatch rate per base, % |	0.22%
                         Deletion rate per base |	0.02%
                        Deletion average length |	2.05
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.79
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	9188822
             % of reads mapped to multiple loci |	3.10%
        Number of reads mapped to too many loci |	634453
             % of reads mapped to too many loci |	0.21%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2177005
                 % of reads unmapped: too short |	0.74%
                Number of reads unmapped: other |	289701
                     % of reads unmapped: other |	0.10%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%