AIH curated blacklist: matched 5 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 393
Pass (FILTER=PASS): 27 (6.9%)
Fail (FILTER=FAIL): 366 (93.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 5
All 5 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 94
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 86
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 25
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 25
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 22
confidence_below_min(low<high): 22
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 18
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 3
Breakdown by confidence:
high: 27 pass, 5 fail (total: 32)
low: 0 pass, 205 fail (total: 205)
medium: 0 pass, 156 fail (total: 156)
Arriba filter: 393 rows -> 27 PASS; wrote aih-tih-sc-6cc13c-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-6cc13c-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-6cc13c-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt