Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/682e371175457d4a901ea58b836e9c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/0e830bcbe878e515254df17d01003a/aih-tih-sc-318819-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/682e371175457d4a901ea58b836e9c/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory