[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-64fc89-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	318831258
Known Splicing Events:	316188554
Partial Novel Splicing Events:	1691402
Novel Splicing Events:	844937
Filtered Splicing Events:	106365

Total splicing  Junctions:	600817
Known Splicing Junctions:	285134
Partial Novel Splicing Junctions:	174060
Novel Splicing Junctions:	141623

===================================================================
Create BED file ...
Create Interact file ...