File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/11/cf88710a5cbad43c54bfb3f047fb53/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 03 21:00:15
                             Started mapping on |	Jun 03 21:07:04
                                    Finished on |	Jun 03 21:58:23
       Mapping speed, Million of reads per hour |	314.19

                          Number of input reads |	268723304
                      Average input read length |	233
                                    UNIQUE READS:
                   Uniquely mapped reads number |	258182744
                        Uniquely mapped reads % |	96.08%
                          Average mapped length |	232.40
                       Number of splices: Total |	256968041
            Number of splices: Annotated (sjdb) |	252931927
                       Number of splices: GT/AG |	253423347
                       Number of splices: GC/AG |	2052864
                       Number of splices: AT/AC |	203916
               Number of splices: Non-canonical |	1287914
                      Mismatch rate per base, % |	0.20%
                         Deletion rate per base |	0.03%
                        Deletion average length |	2.21
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.63
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	8194048
             % of reads mapped to multiple loci |	3.05%
        Number of reads mapped to too many loci |	264611
             % of reads mapped to too many loci |	0.10%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	1889787
                 % of reads unmapped: too short |	0.70%
                Number of reads unmapped: other |	192114
                     % of reads unmapped: other |	0.07%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%